Johan A. Westerhuis

Publication Activity (10 Years)

Years Active: 2006-2023
Publications (10 Years): 11

Top Topics

Sparsity Inducing

Variable Selection

Experimental Designs

Top Venues

PLoS Comput. Biol.

BMC Syst. Biol.

Publications

Balázs Erdos, Johan A. Westerhuis, Michiel E. Adriaens, Shauna D. O'Donovan, Ren Xie, Cécile M. Singh-Povel, Age K. Smilde, Ilja C. W. Arts
Analysis of high-dimensional metabolomics data with complex temporal dynamics using RM-ASCA+. PLoS Comput. Biol. 19 (6) (2023)
Torfinn S. Madssen, Guro F. Giskeødegård, Age K. Smilde, Johan A. Westerhuis
Repeated measures ASCA+ for analysis of longitudinal intervention studies with multivariate outcome data. PLoS Comput. Biol. 17 (11) (2021)
Frans M. van der Kloet, Jeroen Buurmans, Martijs J. Jonker, Age K. Smilde, Johan A. Westerhuis
Increased comparability between RNA-Seq and microarray data by utilization of gene sets. PLoS Comput. Biol. 16 (9) (2020)
Lin Shi, Johan A. Westerhuis, Johan Rosén, Rikard Landberg, Carl Brunius
Variable selection and validation in multivariate modelling. Bioinform. 35 (6) (2019)
Yipeng Song, Johan A. Westerhuis, Nanne Aben, Magali Michaut, Lodewyk F. A. Wessels, Age K. Smilde
Principal component analysis of binary genomics data. Briefings Bioinform. 20 (1) (2019)
J. Camacho, Age K. Smilde, E. Saccenti, Johan A. Westerhuis
All Sparse PCA Models Are Wrong, But Some Are Useful. Part I: Computation of Scores, Residuals and Explained Variance. CoRR (2019)
K. Anton Feenstra, Sanne Abeln, Johan A. Westerhuis, Filipe Brancos dos Santos, Douwe Molenaar, Bas Teusink, Huub C. J. Hoefsloot, Jaap Heringa
Training for translation between disciplines: a philosophy for life and data sciences curricula. Bioinform. 34 (13) (2018)
Nanne Aben, Johan A. Westerhuis, Yipeng Song, Henk A. L. Kiers, Magali Michaut, Age K. Smilde, Lodewyk F. A. Wessels
iTOP: inferring the topology of omics data. Bioinform. 34 (17) (2018)
Mari van Reenen, Johan A. Westerhuis, Carolus J. Reinecke, J. Hendrik Venter
Metabolomics variable selection and classification in the presence of observations below the detection limit using an extension of ERp. BMC Bioinform. 18 (1) (2017)
Frans M. van der Kloet, Patricia Sebastián-León, Ana Conesa, Age K. Smilde, Johan A. Westerhuis
Separating common from distinctive variation. BMC Bioinform. 17 (S-5) (2016)
Mari van Reenen, Carolus J. Reinecke, Johan A. Westerhuis, J. Hendrik Venter
-values applied to metabolomics data. BMC Bioinform. 17 (2016)
Polina Reshetova, Age K. Smilde, Johan A. Westerhuis, Antoine H. C. van Kampen
Using Petri nets for experimental design in a multi-organ elimination pathway. Comput. Biol. Medicine 63 (2015)
Dicle Hasdemir, Huub C. J. Hoefsloot, Johan A. Westerhuis, Age K. Smilde
How informative is your kinetic model?: using resampling methods for model invalidation. BMC Syst. Biol. 8 (2014)
Polina Reshetova, Age K. Smilde, Antoine H. C. van Kampen, Johan A. Westerhuis
Use of prior knowledge for the analysis of high-throughput transcriptomics and metabolomics data. BMC Syst. Biol. 8 (S-2) (2014)
María José Nueda, Ana Conesa, Johan A. Westerhuis, Huub C. J. Hoefsloot, Age K. Smilde, Manuel Talón, Alberto Ferrer
Discovering gene expression patterns in time course microarray experiments by ANOVA-SCA. Bioinform. 23 (14) (2007)
Daniel J. Vis, Johan A. Westerhuis, Age K. Smilde, Jan van der Greef
Statistical validation of megavariate effects in ASCA. BMC Bioinform. 8 (2007)
Henk-Jan Ramaker, Eric N. M. van Sprang, Johan A. Westerhuis, Age K. Smilde
Single channel event (SCE) for managing sensor failures in MSPC. Comput. Chem. Eng. 30 (6-7) (2006)