João M. C. Teixeira

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 6

Top Topics

Molecular Structures

Protein Structure

Subcellular Localization

Amino Acid Sequences

Top Venues

J. Open Source Softw.

Nucleic Acids Res.

PLoS Comput. Biol.

Publications

Giulia Crocioni, Dani L. Bodor, Coos Baakman, Farzaneh M. Parizi, Daniel-T. Rademaker, Gayatri Ramakrishnan, Sven van der Burg, Dario F. Marzella, João M. C. Teixeira, Li C. Xue
DeepRank2: Mining 3D Protein Structures with Geometric Deep Learning. J. Open Source Softw. 9 (96) (2024)
Zi Hao Liu, João M. C. Teixeira, Oufan Zhang, Thomas E. Tsangaris, Jie Li, Claudiu C. Gradinaru, Teresa Head-Gordon, Julie D. Forman-Kay
Local Disordered Region Sampling (LDRS) for ensemble modeling of proteins with experimentally undetermined or low confidence prediction segments. Bioinform. 39 (12) (2023)
Zi Hao Liu, Oufan Zhang, João M. C. Teixeira, Jie Li, Teresa Head-Gordon, Julie D. Forman-Kay
SPyCi-PDB: A modular command-line interface for back-calculating experimental datatypes of protein structures. J. Open Source Softw. 8 (86) (2023)
András Hatos, João M. C. Teixeira, Susana Barrera-Vilarmau, Attila Horvath, Silvio C. E. Tosatto, Michele Vendruscolo, Mónika Fuxreiter
FuzPred: a web server for the sequence-based prediction of the context-dependent binding modes of proteins. Nucleic Acids Res. 51 (W1) (2023)
João P. G. L. M. Rodrigues, Susana Barrera-Vilarmau, João M. C. Teixeira, Marija Sorokina, Elizabeth Seckel, Panagiotis L. Kastritis, Michael Levitt
Insights on cross-species transmission of SARS-CoV-2 from structural modeling. PLoS Comput. Biol. 16 (12) (2020)
João P. G. L. M. Rodrigues, João M. C. Teixeira, Mikaël Trellet, Alexandre M. J. J. Bonvin
pdb-tools: a swiss army knife for molecular structures. F1000Research 7 (2018)