Joanna Polanska

Publication Activity (10 Years)

Years Active: 2004-2024
Publications (10 Years): 41

Top Topics

Biological Data

Gaussian Mixture Modeling

Top Venues

Publications

Michael Götz, Christian Weber, Franciszek Binczyk, Joanna Polanska, Rafal Tarnawski, Barbara Bobek-Billewicz, Ullrich Köthe, Jens Kleesiek, Bram Stieltjes, Klaus H. Maier-Hein
DALSA: Domain Adaptation for Supervised Learning From Sparsely Annotated MR Images. CoRR (2024)
Marek Socha, Wojciech Prazuch, Aleksandra Suwalska, Pawel Foszner, Joanna Tobiasz, Jerzy Jaroszewicz, Katarzyna Gruszczynska, Magdalena Sliwinska, Mateusz Nowak, Barbara Gizycka, Gabriela Zapolska, Tadeusz Popiela, Grzegorz Przybylski, Piotr Fiedor, Malgorzata Pawlowska, Robert Flisiak, Krzysztof Simon, Jerzy Walecki, Andrzej Cieszanowski, Edyta Szurowska, Michal Marczyk, Joanna Polanska
Pathological changes or technical artefacts? The problem of the heterogenous databases in COVID-19 CXR image analysis. Comput. Methods Programs Biomed. 240 (2023)
Anna Glodek, Joanna Polanska, Marta Gawin
Isotopic envelope identification by analysis of the spatial distribution of components in MALDI-MSI data. CoRR (2023)
Wojciech Prazuch, Marek Socha, Anna Mrukwa, Aleksandra Suwalska, Agata Durawa, Malgorzata Jelitto-Górska, Katarzyna Dziadziuszko, Edyta Szurowska, Pawel Bozek, Michal Marczyk, Witold Rzyman, Joanna Polanska
BRONCO: Automated modelling of the bronchovascular bundle using the Computed Tomography Images. CoRR (2023)
Katarzyna Sieradzka, Joanna Polanska
Feature Selection Methods Comparison: Logistic Regression-Based Algorithm and Neural Network Tools. PACBB (2023)
Joanna Zyla, Michal Marczyk, Wojciech Prazuch, Marek Socha, Aleksandra Suwalska, Agata Durawa, Malgorzata Jelitto-Górska, Katarzyna Dziadziuszko, Edyta Szurowska, Witold Rzyman, Piotr Widlak, Joanna Polanska
Combining low-dose CT-based radiomics and metabolomics for early lung cancer screening support. CoRR (2023)
Aleksandra Suwalska, Joanna Siuda, Szymon Kocot, Weronika Zmuda, Monika Rudzinska-Bar, Joanna Polanska
Activation maps of convolutional neural networks as a tool for brain degeneration tracking in early diagnosis of dementia in Parkinson's disease based on magnetic resonance imaging. Signal Image Video Process. 17 (8) (2023)
Kamila Szumala, Joanna Polanska, Joanna Zyla
Unsupervised Investigation of Information Captured in Pathway Activity Score in scRNA-Seq Analysis. IWBBIO (2) (2023)
Grzegorz Mrukwa, Joanna Polanska
DiviK: divisive intelligent K-means for hands-free unsupervised clustering in big biological data. BMC Bioinform. 23 (1) (2022)
Aleksandra Suwalska, Joanna Tobiasz, Wojciech Prazuch, Marek Socha, Pawel Foszner, Jerzy Jaroszewicz, Katarzyna Gruszczynska, Magdalena Sliwinska, Jerzy Walecki, Tadeusz Popiela, Grzegorz Przybylski, Mateusz Nowak, Piotr Fiedor, Malgorzata Pawlowska, Robert Flisiak, Krzysztof Simon, Gabriela Zapolska, Barbara Gizycka, Edyta Szurowska, Michal Marczyk, Andrzej Cieszanowski, Joanna Polanska
POLCOVID: a multicenter multiclass chest X-ray database (Poland, 2020-2021). CoRR (2022)
Wojciech Prazuch, Aleksandra Suwalska, Marek Socha, Joanna Tobiasz, Pawel Foszner, Jerzy Jaroszewicz, Katarzyna Gruszczynska, Magdalena Sliwinska, Jerzy Walecki, Tadeusz Popiela, Grzegorz Przybylski, Andrzej Cieszanowski, Mateusz Nowak, Malgorzata Pawlowska, Robert Flisiak, Krzysztof Simon, Gabriela Zapolska, Barbara Gizycka, Edyta Szurowska, Michal Marczyk, Joanna Polanska
CIRCA: comprehensible online system in support of chest X-rays-based COVID-19 diagnosis. CoRR (2022)
Joanna Tobiasz, Joanna Polanska
How to Compare Various Clustering Outcomes? Metrices to Investigate Breast Cancer Patient Subpopulations Based on Proteomic Profiles. IWBBIO (2) (2022)
Aleksandra Suwalska, Nelita du Plessis-Burger, Gian van der Spuy, Joanna Polanska
Comparison of Batch Effect Removal Methods for High Dimensional Mass Cytometry Data. IWBBIO (2) (2022)
Aleksandra Suwalska, Yingzhe Wang, Ziyu Yuan, Yanfeng Jiang, Dongliang Zhu, Jinhua Chen, Mei Cui, Xingdong Chen, Chen Suo, Joanna Polanska
CMB-HUNT: Automatic detection of cerebral microbleeds using a deep neural network. Comput. Biol. Medicine 151 (Part) (2022)
Justyna Mika, Serge M. Candéias, Christophe Badie, Joanna Polanska
Can We Detect T Cell Receptors from Long-Read RNA-Seq Data? IWBBIO (2) (2022)
Wojciech Prazuch, Malgorzata Jelitto-Gorska, Agata Durawa, Katarzyna Dziadziuszko, Joanna Polanska
Radiomic-Based Lung Nodule Classification in Low-Dose Computed Tomography. IWBBIO (1) (2022)
Aleksandra Suwalska, Joanna Polanska
Preliminary study for a fully automated pre-gating method for high-dimensional mass cytometry data. BIBE (2021)
Agnieszka Cecotka, Lukasz Krol, Grainne O'Brien, Christophe Badie, Joanna Polanska
May Gender Have an Impact on Methylation Profile and Survival Prognosis in Acute Myeloid Leukemia? PACBB (2021)
Joanna Zyla, Kinga Leszczorz, Joanna Polanska
Robustness of Pathway Enrichment Analysis to Transcriptome-Wide Gene Expression Platform. PACBB (2020)
Michal Marczyk, Roman Jaksik, Andrzej Polanski, Joanna Polanska
GaMRed - Adaptive Filtering of High-Throughput Biological Data. IEEE ACM Trans. Comput. Biol. Bioinform. 17 (1) (2020)
Joanna Henzel, Joanna Tobiasz, Michal Kozielski, Malgorzata Bach, Pawel Foszner, Aleksandra Gruca, Mateusz Kania, Justyna Mika, Anna Papiez, Aleksandra Werner, Joanna Zyla, Jerzy Jaroszewicz, Joanna Polanska, Marek Sikora
Classification supporting COVID-19 diagnostics based on patient survey data. CoRR (2020)
Joanna Zyla, Michal Marczyk, Teresa Domaszewska, Stefan H. E. Kaufmann, Joanna Polanska, January 3rd Weiner
Gene set enrichment for reproducible science: comparison of CERNO and eight other algorithms. Bioinform. 35 (24) (2019)
Anna Papiez, Michal Marczyk, Joanna Polanska, Andrzej Polanski
BatchI: Batch effect Identification in high-throughput screening data using a dynamic programming algorithm. Bioinform. 35 (11) (2019)
Kinga Leszczorz, Omid Azimzadeh, Soile Tapio, Michael Atkinson, Joanna Polanska
Mathematical Modelling and Effect Size Analysis in Support of Searching for the Proteomic Signature of Radiotherapy Toxicity. BIBE (2019)
Anna Papiez, Christophe Badie, Joanna Polanska
Machine learning techniques combined with dose profiles indicate radiation response biomarkers. Int. J. Appl. Math. Comput. Sci. 29 (1) (2019)
Joanna Tobiasz, Christos Hatzis, Joanna Polanska
Breast Cancer Heterogeneity Investigation: Multiple k-Means Clustering Approach. BIBE (2019)
Anna Papiez, Marcin Skrzypski, Amelia Szymanowska-Narloch, Ewa Jassem, Agnieszka Maciejewska, Ryszard Pawlowski, Rafal Dziadziuszko, Jacek Jassem, Witold Rzyman, Joanna Polanska
Can an Integrative SNP Approach Substitute Standard Identification in Comprehensive Case/Control Analyses? PACBB (2018)
Joanna Tobiasz, Najla Al-Harbi, Sara Bin Judia, Salma Majid, Ghazi Alsbeih, Joanna Polanska
Are Radiosensitive and Regular Response Cells Homogeneous in Their Correlations Between Copy Number State and Surviving Fraction After Irradiation? IWBBIO (1) (2018)
Joanna Zyla, Michal Marczyk, Joanna Polanska
Reproducibility of Finding Enriched Gene Sets in Biological Data Analysis. PACBB (2017)
Franciszek Binczyk, Bram Stjelties, Christian Weber, Michael Götz, Klaus H. Maier-Hein, Hans-Peter Meinzer, Barbara Bobek-Billewicz, Rafal Tarnawski, Joanna Polanska
MiMSeg - an algorithm for automated detection of tumor tissue on NMR apparent diffusion coefficient maps. Inf. Sci. 384 (2017)
Joanna Zyla, Michal Marczyk, January 3rd Weiner, Joanna Polanska
Ranking metrics in gene set enrichment analysis: do they matter? BMC Bioinform. 18 (1) (2017)
Anna Krawczyk, Joanna Polanska
Comparative Analysis of MicroRNA-Target Gene Interaction Prediction Algorithms Based on Integrated P-Value Calculation. ICMMI (2017)
Agnieszka Cecotka, Joanna Polanska
Novel Method of Identifying DNA Methylation Fingerprint of Acute Myeloid Leukaemia. PACBB (2017)
Lukasz Krol, Joanna Polanska
Multidimensional Feature Selection and Interaction Mining with Decision Tree Based Ensemble Methods. PACBB (2017)
Michal Marczyk, Joanna Polanska, Andrzej Polanski
Improving peak detection by Gaussian mixture modeling of mass spectral signal. ICFSP (2017)
Grzegorz Mrukwa, Grzegorz Drazek, Monika Pietrowska, Piotr Widlak, Joanna Polanska
A Novel Divisive iK-Means Algorithm with Region-Driven Feature Selection as a Tool for Automated Detection of Tumour Heterogeneity in MALDI IMS Experiments. IWBBIO (2016)
Joanna Zyla, Christophe Badie, Ghazi Alsbeih, Joanna Polanska
Multigene P-value Integration Based on SNPs Investigation for Seeking Radiosensitivity Signatures. IWBBIO (2016)
Wojciech Labaj, Anna Papiez, Joanna Polanska, Andrzej Polanski
Deep Data Analysis of a Large Microarray Collection for Leukemia Biomarker Identification. PACBB (2016)
Anna Krawczyk, Joanna Polanska
Comparative Analysis of microRNA-Target Gene Interaction Prediction Algorithms - The Attempt to Compare the Results of Three Algorithms. IWBBIO (2016)
Joanna Zyla, Michal Marczyk, Joanna Polanska
Sensitivity, Specificity and Prioritization of Gene Set Analysis When Applying Different Ranking Metrics. PACBB (2016)
Michael Götz, Christian Weber, Franciszek Binczyk, Joanna Polanska, Rafal Tarnawski, Barbara Bobek-Billewicz, Ullrich Köthe, Jens Kleesiek, Bram Stieltjes, Klaus H. Maier-Hein
DALSA: Domain Adaptation for Supervised Learning From Sparsely Annotated MR Images. IEEE Trans. Medical Imaging 35 (1) (2016)
Anna Papiez, Sylwia Kabacik, Christophe Badie, Simon Bouffler, Joanna Polanska
Statistical Integration of p-values for Enhancing Discovery of Radiotoxicity Gene Signatures. IWBBIO (1) (2015)
Franciszek Binczyk, Michal Marczyk, Joanna Polanska
Mixture Model Based Efficient Method for Magnetic Resonance Spectra Quantification. IWBBIO (2) (2015)
Michael Götz, Christian Weber, Franciszek Binczyk, Joanna Polanska, Rafal Tarnawski, Barbara Bobek-Billewicz, Hans-Peter Meinzer, Bram Stieltjes, Klaus H. Maier-Hein
Automatische Tumorsegmentierung mit spärlich annotierter Lernbasis. Bildverarbeitung für die Medizin (2015)
Marzena Dolbniak, Joanna Zyla, Sylwia Kabacik, Grainne Manning, Christophe Badie, Ghazi Alsbeih, Joanna Polanska
Is the Identification of SNP-miRNA Interactions Supporting the Prediction of Human Lymphocyte Transcriptional Radiation Responses?. BIOINFORMATICS (2015)
Michal Marczyk, Grzegorz Drazek, Monika Pietrowska, Piotr Widlak, Joanna Polanska, Andrzej Polanski
Modeling of Imaging Mass Spectrometry Data and Testing by Permutation for Biomarkers Discovery in Tissues. ICCS (2015)
Christian Weber, Michael Götz, Franciszek Binczyk, Joanna Polanska, Rafal Tarnawski, Barbara Bobek-Billewicz, Hans-Peter Meinzer, Bram Stieltjes, Klaus H. Maier-Hein
Überwachtes Lernen zur Prädiktion von Tumorwachstum. Bildverarbeitung für die Medizin (2015)
Michal Staniszewski, Franciszek Binczyk, Agnieszka Skorupa, Lukasz Boguszewicz, Maria Sokol, Joanna Polanska, Andrzej Polanski
Comparison of Black Box Implementations of Two Algorithms of Processing of NMR Spectra, Gaussian Mixture Model and Singular Value Decomposition. BIOSIGNALS (2015)
Michal Marczyk, Lukasz Krol, Joanna Polanska
Automatic detection of outlying microarrays using multi-array quality metrics. IWBBIO (2014)
Pawel Foszner, Aleksandra Gruca, Andrzej Polanski, Michal Marczyk, Roman Jaksik, Joanna Polanska
An Efficient Algorithm for Microarray Probes Re-annotation. Trans. Comput. Collect. Intell. 13 (2014)
Franciszek Binczyk, Rafal Tarnawski, Joanna Polanska
Improvement in the accuracy of Nuclear Magnetic Resonance spectrum analysis by automatic tuning of phase correction algorithms. IWBBIO (2014)
Joanna Zyla, Christophe Badie, Ghazi Alsbeih, Joanna Polanska
Modelling of Genetic Interactions in GWAS Reveals More Complex Relations between Genotype and Phenotype. BIOINFORMATICS (2014)
Michal Marczyk, Joanna Polanska
Methods for Quality Control of Low-resolution MALDI-ToF Spectra. BIOINFORMATICS (2014)
Lukasz Krol, Ghazi Alsbeih, Christophe Badie, Joanna Polanska
Impact of missing genotype imputation on the power of Genome Wide Association Studies. IWBBIO (2014)
Anna Papiez, Paul Finnon, Christophe Badie, Simon Bouffler, Joanna Polanska
Integrating Expression Data from Different Microarray Platforms in Search of Biomarkers of Radiosensitivity. IWBBIO (2014)
Roman Jaksik, Michal Marczyk, Joanna Polanska, Joanna Rzeszowska-Wolny
Sources of High Variance between Probe Signals in Affymetrix Short Oligonucleotide Microarrays. Sensors 14 (1) (2014)
Joanna Zyla, Paul Finnon, Robert Bulman, Simon Bouffler, Christophe Badie, Joanna Polanska
Investigation for Genetic Signature of Radiosensitivity - Data Analysis. ICMMI (2013)
Joanna Zyla, Joanna Polanska, Paul Finnon, Robert Bulman, Simon Bouffler, Christophe Badie
Seeking for Genetic Signature of Radiosensitivity - Methods for Data Analysis. IWBBIO (2013)
Michal Marczyk, Roman Jaksik, Andrzej Polanski, Joanna Polanska
Adaptive filtering of microarray gene expression data based on Gaussian mixture decomposition. BMC Bioinform. 14 (2013)
Anna Cichonska, Roman Jaksik, Joanna Polanska, Wieslawa Widlak
Comparative analysis of the annotation systems of Mus musculus high density expression microarray. IWBBIO (2013)
Michal Marczyk, Joanna Polanska, Andrzej Polanski
Comparison of Algorithms for Profile-Based Alignment of Low Resolution MALDI-ToF Spectra. ICMMI (2013)
Joanna Polanska, Franciszek Binczyk, Anna Hebda, Barbara Bobek-Billewicz
Gaussian mixture model based analysis of apparent diffusion coefficient maps for differentiation between malignant and benign brain tumours - preliminary results. IWBBIO (2013)
Joanna Polanska, Malgorzata Plechawska, Monika Pietrowska, Lukasz Marczak
Gaussian mixture decomposition in the analysis of MALDI-TOF spectra. Expert Syst. J. Knowl. Eng. 29 (3) (2012)
Pawel Foszner, Aleksandra Gruca, Andrzej Polanski, Michal Marczyk, Roman Jaksik, Joanna Polanska
Efficient Algorithm for Microarray Probes Re-annotation. ICCCI (2) (2011)
Pawel Foszner, Aleksandra Gruca, Joanna Polanska
Distant Analysis of the GENEPI-ENTB Databank - System Overview. CN (2010)
Malgorzata Plechawska, Joanna Polanska, Andrzej Polanski, Monika Pietrowska, Rafal Tarnawski, Piotr Widlak, Maciej Stobiecki, Lukasz Marczak
Analyze of Maldi-TOF Proteomic Spectra with Usage of Mixture of Gaussian Distributions. ICMMI (2009)
Malgorzata Plechawska, Joanna Polanska
Simulation of the Usage of Gaussian Mixture Models for the Purpose of Modelling Virtual Mass Spectrometry Data. MIE (2009)
Zbigniew Starosolski, Joanna Polanska, Mark Groen, Andrzej Polanski
Estimating Regions of Absolute Stability with the Use of Piecewise Linear Lyapunov Functions. Eur. J. Control 10 (6) (2004)