Jia-Ming Chang

Publication Activity (10 Years)

Years Active: 2002-2024
Publications (10 Years): 11

Top Topics

Protein Function Prediction

Top Venues

Nucleic Acids Res.

Publications

Shang-Jung Wen, Jia-Ming Chang, Fang Yu
scGHSOM: Hierarchical clustering and visualization of single-cell and CRISPR data using growing hierarchical SOM. CoRR (2024)
Cheng-Wei Ching, Jia-Ming Chang, Jian-Jhih Kuo, Chih-Yu Wang
Dual-Objective Personalized Federated Service System With Partially-Labeled Data Over Wireless Networks. IEEE Trans. Serv. Comput. 16 (5) (2023)
Jia-Ming Chang, Yi-Fu Weng, Wei-Ting Chang, Fu-An Lin, Giacomo Cavalli
HiCmapTools: a tool to access HiC contact maps. BMC Bioinform. 23 (1) (2022)
Jia-Ming Chang, Evan W. Floden, Javier Herrero, Olivier Gascuel, Paolo Di Tommaso, Cédric Notredame
Incorporating alignment uncertainty into Felsenstein's phylogenetic bootstrap to improve its reliability. Bioinform. 37 (11) (2021)
Yu Ting Hsu, Jia-Ming Chang
Stability of single-cell dimension reduction after data shuffling. ISPACS (2021)
Jhen Yuan Yang, Jia-Ming Chang
Pattern recognition of topologically associating domains using deep learning. BMC Bioinform. (10) (2021)
Yi-Wei Liu, Tz-Wei Hsu, Che-Yu Chang, Wen-Hung Liao, Jia-Ming Chang
GODoc: high-throughput protein function prediction using novel k-nearest-neighbor and voting algorithms. BMC Bioinform. (6) (2020)
Che-Yu Chang, Tz-Wei Hsu, Jia-Ming Chang
PSLCNN: Protein Subcellular Localization Prediction for Eukaryotes and Prokaryotes Using Deep Learning. TAAI (2019)
Yu-Ting Huang, Meng-Shin Shiao, Chen-An Tasi, Kuer-Yuan Lan, Chieh-Hsi Lin, Natini Jianawath, Jia-Ming Chang
Identification of Alternative Splicing Characteristic Associated with Clear-Cell Ovarian Cancer from Paired Normal and Tumor Tissues. ICMLC (2019)
Evan W. Floden, Paolo Di Tommaso, Maria Chatzou, Cedrik Magis, Cédric Notredame, Jia-Ming Chang
PSI/TM-Coffee: a web server for fast and accurate multiple sequence alignments of regular and transmembrane proteins using homology extension on reduced databases. Nucleic Acids Res. 44 (Webserver-Issue) (2016)
Maria Chatzou, Cedrik Magis, Jia-Ming Chang, Carsten Kemena, Giovanni Bussotti, Ionas Erb, Cédric Notredame
Multiple sequence alignment modeling: methods and applications. Briefings Bioinform. 17 (6) (2016)
Jia-Ming Chang, Paolo Di Tommaso, Vincent Lefort, Olivier Gascuel, Cédric Notredame
TCS: a web server for multiple sequence alignment evaluation and phylogenetic reconstruction. Nucleic Acids Res. 43 (Webserver-Issue) (2015)
Emily Chia-Yu Su, Jia-Ming Chang, Cheng-Wei Cheng, Ting-Yi Sung, Wen-Lian Hsu
Prediction of nuclear proteins using nuclear translocation signals proposed by probabilistic latent semantic indexing. BMC Bioinform. 13 (S-17) (2012)
Jia-Ming Chang, Paolo Di Tommaso, Jean-François Taly, Cédric Notredame
Accurate multiple sequence alignment of transmembrane proteins with PSI-Coffee. BMC Bioinform. 13 (S-4) (2012)
Paolo Di Tommaso, Sébastien Moretti, Ioannis Xenarios, Miquel Orobitg, Alberto Montanyola, Jia-Ming Chang, Jean-François Taly, Cédric Notredame
T-Coffee: a web server for the multiple sequence alignment of protein and RNA sequences using structural information and homology extension. Nucleic Acids Res. 39 (Web-Server-Issue) (2011)
Kuo-Liang Chung, Po-Hsuan Liao, Jia-Ming Chang
Novel efficient two-pass algorithm for closed polygonal approximation based on LISE and curvature constraint criteria. J. Vis. Commun. Image Represent. 19 (4) (2008)
Kuen-Pin Wu, Jia-Ming Chang, Jun-Bo Chen, Chi-Fon Chang, Wen-Jin Wu, Tai-Huang Huang, Ting-Yi Sung, Wen-Lian Hsu
RIBRA - An Error-Tolerant Algorithm for the NMR Backbone Assignment Problem. J. Comput. Biol. 13 (2) (2006)
Kuen-Pin Wu, Jia-Ming Chang, Jun-Bo Chen, Chi-Fon Chang, Wen-Jin Wu, Tai-Huang Huang, Ting-Yi Sung, Wen-Lian Hsu
RIBRA-An Error-Tolerant Algorithm for the NMR Backbone Assignment Problem. RECOMB (2005)
Hsin-Nan Lin, Jia-Ming Chang, Kuen-Pin Wu, Ting-Yi Sung, Wen-Lian Hsu
HYPROSP II-A knowledge-based hybrid method for protein secondary structure prediction based on local prediction confidence. Bioinform. 21 (15) (2005)
Hsin-Nan Lin, Kuen-Pin Wu, Jia-Ming Chang, Ting-Yi Sung, Wen-Lian Hsu
GANAA Genetic Algorithm for NMR Backbone Resonance Assignment. CSB Workshops (2005)
Wen-Lian Hsu, Jia-Ming Chang, Wen-Chi Chou, Jun-Bo Chen, Kuen-Pin Wu, Ting-Yi Sung, Chi-Fon Chang, Wen-Jin Wu, Tai-Huang Huang
An Iterative Relaxation Technique for the NMR Backbone Assignment Problem. BIBE (2004)
Chuan Yi Tang, Chin Lung Lu, Margaret Dah-Tsyr Chang, Yin-Te Tsai, Yuh-Ju Sun, Kun-Mao Chao, Jia-Ming Chang, Yu-Han Chiou, Chia-Mao Wu, Hao-Teng Chang, Wei-I Chou
Constrained Multiple Sequence Alignment Tool Development Andits Application to Rnase Family Alignment. J. Bioinform. Comput. Biol. 1 (2) (2003)
Rong-Jong Wai, Jia-Ming Chang
Implementation of robust wavelet-neural-network sliding-mode control for induction servo motor drive. IEEE Trans. Ind. Electron. 50 (6) (2003)
Chuan Yi Tang, Chin Lung Lu, Margaret Dah-Tsyr Chang, Yin-Te Tsai, Yuh-Ju Sun, Kun-Mao Chao, Jia-Ming Chang, Yu-Han Chiou, Chia-Mao Wu, Hao-Teng Chang, Wei-I Chou
Constrained Multiple Sequence Alignment Tool Development and Its Application to RNase Family Alignment. CSB (2002)