Jaume Bonet

Publication Activity (10 Years)

Years Active: 2007-2023
Publications (10 Years): 6

Top Topics

Classification Process

Computational Methods

Protein Interaction

Top Venues

PLoS Comput. Biol.

Bio Algorithms Med Syst.

Publications

Patrick Gohl, Jaume Bonet, Oriol Fornes, Joan Planas-Iglesias, Narcis Fernandez-Fuentes, Baldo Oliva
SBILib: a handle for protein modeling and engineering. Bioinform. 39 (10) (2023)
Andreas Scheck, Stéphane Rosset, Michaël Defferrard, Andreas Loukas, Jaume Bonet, Pierre Vandergheynst, Bruno E. Correia
RosettaSurf - A surface-centric computational design approach. PLoS Comput. Biol. 18 (3) (2022)
Joaquim Aguirre-Plans, Alberto Meseguer, Ruben Molina-Fernandez, Manuel Alejandro Marín-López, Gaurav Jumde, Kevin Casanova, Jaume Bonet, Oriol Fornes, Narcis Fernandez-Fuentes, Baldo Oliva
SPServer: split-statistical potentials for the analysis of protein structures and protein-protein interactions. BMC Bioinform. 22 (1) (2021)
Jaume Bonet, Zander Harteveld, Fabian Sesterhenn, Andreas Scheck, Bruno E. Correia
rstoolbox - a Python library for large-scale analysis of computational protein design data and structural bioinformatics. BMC Bioinform. 20 (1) (2019)
Jaume Bonet, Sarah Wehrle, Karen Schriever, Che Yang, Anne Billet, Fabian Sesterhenn, Andreas Scheck, Freyr Sverrisson, Barbora Veselkova, Sabrina Vollers, Roxanne Lourman, Mélanie Villard, Stéphane Rosset, Thomas Krey, Bruno E. Correia
Rosetta FunFolDes - A general framework for the computational design of functional proteins. PLoS Comput. Biol. 14 (11) (2018)
Manuel Alejandro Marín-López, Joan Planas-Iglesias, Joaquim Aguirre-Plans, Jaume Bonet, Javier García-García, Narcis Fernandez-Fuentes, Baldo Oliva
On the mechanisms of protein interactions: predicting their affinity from unbound tertiary structures. Bioinform. 34 (4) (2018)
Jaume Bonet, András Fiser, Baldo Oliva, Narcis Fernandez-Fuentes
Smotifs as structural local descriptors of supersecondary elements: classification, completeness and applications. Bio Algorithms Med Syst. 10 (4) (2014)
Jaume Bonet, Joan Segura, Joan Planas-Iglesias, Baldomero Oliva, Narcis Fernandez-Fuentes
structure-based protein design. Bioinform. 30 (13) (2014)
Jaume Bonet, Joan Planas-Iglesias, Javier García-García, Manuel Alejandro Marín-López, Narcis Fernandez-Fuentes, Baldo Oliva
ArchDB 2014: structural classification of loops in proteins. Nucleic Acids Res. 42 (Database-Issue) (2014)
Joan Planas-Iglesias, Manuel Alejandro Marín-López, Jaume Bonet, Javier García-García, Baldo Oliva
iLoops: a protein-protein interaction prediction server based on structural features. Bioinform. 29 (18) (2013)
Ramon Aragues, Andrej Sali, Jaume Bonet, Marc A. Martí-Renom, Baldo Oliva
Characterization of Protein Hubs by Inferring Interacting Motifs from Protein Interactions. PLoS Comput. Biol. 3 (9) (2007)