James Arram

Publication Activity (10 Years)

Years Active: 2013-2020
Publications (10 Years): 5

Top Topics

Reference Genome

Gpu Accelerated

Top Venues

IEEE ACM Trans. Comput. Biol. Bioinform.

Imperial College London, UK (PHD)

Education History

Imperial College London, UK

PHD

Publications

Izaak Coleman, Giacomo Corleone, James Arram, Ho-Cheung Ng, Luca Magnani, Wayne Luk
GeDi: applying suffix arrays to increase the repertoire of detectable SNVs in tumour genomes. BMC Bioinform. 21 (1) (2020)
Paul Grigoras, Pavel Burovskiy, James Arram, Xinyu Niu, Kit Cheung, Junyi Xie, Wayne Luk
dfesnippets: An Open-Source Library for Dataflow Acceleration on FPGAs. ARC (2017)
James Arram, Thomas Kaplan, Wayne Luk, Peiyong Jiang
Leveraging FPGAs for Accelerating Short Read Alignment. IEEE ACM Trans. Comput. Biol. Bioinform. 14 (3) (2017)
James Arram, Wayne Luk, Peiyong Jiang
Ramethy: Reconfigurable Acceleration of Bisulfite Sequence Alignment. FPGA (2015)
James Arram, Moritz Pflanzer, Thomas Kaplan, Wayne Luk
FPGA acceleration of reference-based compression for genomic data. FPT (2015)
James Arram, Wayne Luk, Peiyong Jiang
Reconfigurable filtered acceleration of short read alignment. FPT (2013)
James Arram, Kuen Hung Tsoi, Wayne Luk, Peiyong Jiang
Reconfigurable Acceleration of Short Read Mapping. FCCM (2013)
James Arram, Kuen Hung Tsoi, Wayne Luk, Peiyong Jiang
Hardware Acceleration of Genetic Sequence Alignment. ARC (2013)