Ishwor Thapa

Publication Activity (10 Years)

Years Active: 2007-2024
Publications (10 Years): 13

Top Topics

Data Integration

Precision Agriculture

Top Venues

Publications

Suyeon Kim, Ishwor Thapa, Hesham H. Ali
A Robust Network Model for Studying Microbiomes in Precision Agriculture Applications. ICCS (6) (2024)
Suyeon Kim, Ishwor Thapa, Hesham Ali
A multi-omics graph database for data integration and knowledge extraction. BCB (2022)
Ishwor Thapa, Hesham Ali
A Multiomics Graph Database System for Biological Data Integration and Cancer Informatics. J. Comput. Biol. 28 (2) (2021)
Suyeon Kim, Ishwor Thapa, Farial Samadi, Hesham Ali
Computational Approaches for Drug Design: A Focus on Drug Repurposing. IWBBIO (2020)
Qianran Li, Dario Ghersi, Ishwor Thapa, Ling Zhang, Hesham Ali, Kate Cooper
Measurement of structural change in co-expression networks from cancer gene expression data. Int. J. Data Min. Bioinform. 24 (4) (2020)
Suyeon Kim, Ishwor Thapa, Ling Zhang, Hesham Ali
On Identifying Candidates for Drug Repurposing for the Treatment of Ulcerative Colitis using Gene Expression Data. IWBBIO (1) (2019)
Matthew L. Hale, Ishwor Thapa, Dario Ghersi
FunSet: an open-source software and web server for performing and displaying Gene Ontology enrichment analysis. BMC Bioinform. 20 (1) (2019)
Ishwor Thapa, Hesham Ali
A New Graph Database System for Multi-omics Data Integration and Mining Complex Biological Information. ICCABS (2019)
Qianran Li, Dario Ghersi, Ishwor Thapa, Ling Zhang, Hesham Ali, Kate Cooper
Identifying Structural Changes in Correlation Networks Models of Cancer Gene Expression by Stage. BIBM (2019)
Ling Zhang, Ishwor Thapa, Christian Haas, Dhundy Bastola
Multiplatform biomarker identification using a data-driven approach enables single-sample classification. BMC Bioinform. 20 (1) (2019)
Suyeon Kim, Ishwor Thapa, Hesham H. Ali
A Graph-Theoretic Approach for Identifying Bacterial Inter-correlations and Functional Pathways in Microbiome Data. BIBM (2018)
Suyeon Kim, Ishwor Thapa, Guoqing Lu, Lifeng Zhu, Hesham H. Ali
A systems biology approach for modeling microbiomes using split graphs. BIBM (2017)
Oliver Bonham-Carter, Ishwor Thapa, Steven From, Dhundy Bastola
A study of bias and increasing organismal complexity from their post-translational modifications and reaction site interplays. Briefings Bioinform. 18 (1) (2017)
Julia Warnke-Sommer, Ishwor Thapa, Hesham H. Ali
Next generation sequence assembler mis-assembly of phage genomes with terminal redundancy. BIBM (2015)
Jasjit K. Banwait, Schuyler P. Dougherty, Ishwor Thapa, Dhundy Kiran Bastola
Guilt-by association approach to identify novel human aging-related genes using protein domains. BIBM (2015)
Akshay Balasubramanya, Ishwor Thapa, Dhundy Bastola, Dario Ghersi
A novel approach to identify shared fragments in drugs and natural products. BIBM (2015)
Ishwor Thapa, Howard S. Fox, Dhundy R. Bastola
Transcriptome analysis of HIV-1 virus in understanding the effect of antiretroviral drugs (cART) and methamphetamine on the virus. BIBM (2015)
Oliver Bonham-Carter, Ishwor Thapa, Dhundy Bastola
Evidence of post translational modification bias extracted from the tRNA and corresponding amino acid interplay across a set of diverse organisms. BCB (2014)
Kathryn Dempsey, Ishwor Thapa, Claudia Cortes, Zach Eriksen, Dhundy Bastola, Hesham H. Ali
On Mining Biological Signals Using Correlation Networks. ICDM Workshops (2013)
Rohan Khazanchi, Kathryn Dempsey, Ishwor Thapa, Hesham H. Ali
On Identifying and Analyzing Significant Nodes in Protein-Protein Interaction Networks. ICDM Workshops (2013)
Ishwor Thapa, Sanjukta Bhowmick, Dhundy Bastola
A comparison between hierarchical clustering and community detection method in the collection of gene targets for molecular identification of pathogenic fungi. BIBM Workshops (2012)
Kathryn Dempsey, Ishwor Thapa, Dhundy Bastola, Hesham H. Ali
Functional identification in correlation networks using gene ontology edge annotation. Int. J. Comput. Biol. Drug Des. 5 (3/4) (2012)
Dhundy Bastola, Scott McGrath, Sanjukta Bhowmick, Ishwor Thapa
A Comparison of Computational Approaches in the Molecular Identification of Pathogenic Organisms. HISB (2012)
Kathryn Dempsey, Ishwor Thapa, Dhundy Bastola, Hesham H. Ali
Identifying modular function via edge annotation in gene correlation networks using Gene Ontology search. BIBM Workshops (2011)
Ishwor Thapa, Harvey P. Siy
Assessing the impact of refactoring activities on the JHotDraw project. SAC (2010)
Sagun Dhakhwa, Patrick A. V. Hall, Ganesh Bahadur Ghimire, Prakash Manandhar, Ishwor Thapa
Sambad - Computer Interfaces for Non-literates. HCI (1) (2007)