Hongzhe Guo

Publication Activity (10 Years)

Years Active: 2016-2023
Publications (10 Years): 11

Top Topics

Machine Learning Methods

Comprehensive Evaluation

Spatial Features

Top Venues

Comput. Biol. Medicine

Publications

Mengbo Zhu, Changjun Li, Kebo Lv, Hongzhe Guo, Rui Hou, Geng Tian, Jialiang Yang
MLSpatial: A machine-learning method to reconstruct the spatial distribution of cells from scRNA-seq by extracting spatial features. Comput. Biol. Medicine 159 (2023)
Ping Meng, Guohua Wang, Hongzhe Guo, Tao Jiang
Identifying cancer driver genes using a two-stage random walk with restart on a gene interaction network. Comput. Biol. Medicine 158 (2023)
Yadong Liu, Hongzhe Guo, Zhenhao Lu, Yadong Wang, Zhongyu Liu, Tao Jiang
Comprehensive evaluation of RNA-seq alignment methods based on long-read sequencing data. BIBM (2023)
Tao Jiang, Shiqi Liu, Hongzhe Guo
Reply: Correspondence on NanoVar's performance outlined by Jiang T. et al. in 'Long-read sequencing settings for efficient structural variation detection based on comprehensive evaluation'. BMC Bioinform. 24 (1) (2023)
Hongzhe Guo, Zhongbo Yang, Tao Jiang, Shiqi Liu, Yadong Wang, Zhe Cui
Evaluation of classification in single cell atac-seq data with machine learning methods. BMC Bioinform. (5) (2022)
Shixin Zhu, Hongzhe Guo, Xiaoshan Kai, Zhonghua Sun
New quantum codes derived from images of cyclic codes. Quantum Inf. Process. 21 (7) (2022)
Tao Jiang, Shiqi Liu, Shuqi Cao, Yadong Liu, Zhe Cui, Yadong Wang, Hongzhe Guo
Long-read sequencing settings for efficient structural variation detection based on comprehensive evaluation. BMC Bioinform. 22 (1) (2021)
Hongzhe Guo, Yilei Fu, Yan Gao, Junyi Li, Yadong Wang, Bo Liu
deGSM: Memory Scalable Construction Of Large Scale de Bruijn Graph. IEEE ACM Trans. Comput. Biol. Bioinform. 18 (6) (2021)
Hongzhe Guo, Bo Liu, Dengfeng Guan, Yilei Fu, Yadong Wang
Fast read alignment with incorporation of known genomic variants. BMC Medical Informatics Decis. Mak. (6) (2019)
Hongzhe Guo, Bo Liu, Dengfeng Guan, Yilei Fu, Yadong Wang
Fast variation-aware read alignment with deBGA-VARA. BIBM (2018)
Bo Liu, Hongzhe Guo, Michael Brudno, Yadong Wang
deBGA: read alignment with de Bruijn graph-based seed and extension. Bioinform. 32 (21) (2016)