Heshan Lin

Publication Activity (10 Years)

Years Active: 2005-2016
Publications (10 Years): 1

Top Topics

Heterogeneous Computing

Protein Structure

Top Venues

GLOBECOM Workshops

Publications

Heshan Lin, Jinyan Xu, Degang Jiang, Yikang Gao, Lianhuan Wei, Jianhui Liu
Sand dam dynamic monitoring in coastal areas based on time-series remote sensing images. IGARSS (2016)
Chao-Chin Wu, Jenn-Yang Ke, Heshan Lin, Syun-Sheng Jhan
Adjusting Thread Parallelism Dynamically to Accelerate Dynamic Programming with Irregular Workload Distribution on GPGPUs. Int. J. Grid High Perform. Comput. 6 (1) (2014)
Jing Zhang, Hao Wang, Heshan Lin, Wu-chun Feng
cuBLASTP: Fine-Grained Parallelization of Protein Sequence Search on a GPU. IPDPS (2014)
Xiaokui Shu, John Smiy, Danfeng (Daphne) Yao, Heshan Lin
Massive distributed and parallel log analysis for organizational security. GLOBECOM Workshops (2013)
Jing Zhang, Hao Wang, Heshan Lin, Wu-chun Feng
Consolidating Applications for Energy Efficiency in Heterogeneous Computing Systems. HPCC/EUC (2013)
Jing Zhang, Heshan Lin, Pavan Balaji, Wu-chun Feng
Optimizing Burrows-Wheeler Transform-Based Sequence Alignment on Multicore Architectures. CCGRID (2013)
Kenneth S. Lee, Heshan Lin, Wu-chun Feng
Performance characterization of data-intensive kernels on AMD Fusion architectures. Comput. Sci. Res. Dev. 28 (2-3) (2013)
Feng Ji, Heshan Lin, Xiaosong Ma
RSVM: A Region-based Software Virtual Memory for GPU. PACT (2013)
Shucai Xiao, Pavan Balaji, James Dinan, Qian Zhu, Rajeev Thakur, Susan Coghlan, Heshan Lin, Gaojin Wen, Jue Hong, Wu-chun Feng
Transparent Accelerator Migration in a Virtualized GPU Environment. CCGRID (2012)
Wu-chun Feng, Heshan Lin, Thomas Scogland, Jing Zhang
OpenCL and the 13 dwarfs: a work in progress. ICPE (2012)
Heshan Lin, Xiaosong Ma, Wu-chun Feng
Reliable MapReduce computing on opportunistic resources. Clust. Comput. 15 (2) (2012)
Karl Pereira, Peter Athanas, Heshan Lin, Wu Feng
Spectral Method Characterization on FPGA and GPU Accelerators. ReConFig (2011)
Shucai Xiao, Heshan Lin, Wu-chun Feng
Accelerating Protein Sequence Search in a Heterogeneous Computing System. IPDPS (2011)
Kenneth S. Lee, Heshan Lin, Wu-chun Feng
Poster: characterizing the impact of memory-access techniques on AMD fusion. SC Companion (2011)
Marwa K. Elteir, Heshan Lin, Wu-chun Feng, Tom Scogland
StreamMR: An Optimized MapReduce Framework for AMD GPUs. ICPADS (2011)
Heshan Lin, Xiaosong Ma, Wu-chun Feng, Nagiza F. Samatova
Coordinating Computation and I/O in Massively Parallel Sequence Search. IEEE Trans. Parallel Distributed Syst. 22 (4) (2011)
Chao-Chin Wu, Jenn-Yang Ke, Heshan Lin, Wu-chun Feng
Optimizing Dynamic Programming on Graphics Processing Units via Adaptive Thread-Level Parallelism. ICPADS (2011)
Tae-Hyuk Ahn, Damian Dechev, Heshan Lin, Helgi Adalsteinsson, Curtis L. Janssen
Evaluating Performance Optimizations of Large-scale Genomic Sequence Search Applications using SST/macro. SIMULTECH (2011)
Marwa K. Elteir, Heshan Lin, Wu-chun Feng
Performance Characterization and Optimization of Atomic Operations on AMD GPUs. CLUSTER (2011)
Thomas Scogland, Heshan Lin, Wu-chun Feng
A first look at integrated GPUs for green high-performance computing. Comput. Sci. Res. Dev. 25 (3-4) (2010)
Marwa K. Elteir, Heshan Lin, Wu-chun Feng
Enhancing MapReduce via Asynchronous Data Processing. ICPADS (2010)
Heshan Lin, Xiaosong Ma, Jeremy S. Archuleta, Wu-chun Feng, Mark K. Gardner, Zhe Zhang
MOON: MapReduce On Opportunistic eNvironments. HPDC (2010)
Pavan Balaji, Wu-chun Feng, Heshan Lin, Jeremy S. Archuleta, Satoshi Matsuoka, Andrew S. Warren, João Carlos Setubal, Ewing L. Lusk, Rajeev Thakur, Ian T. Foster, Daniel S. Katz, Shantenu Jha, K. Shinpaugh, Susan Coghlan, Daniel A. Reed
Global-scale distributed I/O with ParaMEDIC. Concurr. Comput. Pract. Exp. 22 (16) (2010)
Wu-chun Feng, Heshan Lin
The Green500 List: Year two. IPDPS Workshops (2010)
Yang Jiao, Heshan Lin, Pavan Balaji, Wu-chun Feng
Power and Performance Characterization of Computational Kernels on the GPU. GreenCom/CPSCom (2010)
Heshan Lin, Pavan Balaji, Ruth Poole, Carlos P. Sosa, Xiaosong Ma, Wu-chun Feng
Massively parallel genomic sequence search on the Blue Gene/P architecture. SC (2008)
Heshan Lin, Xiaosong Ma, Jiangtian Li, Ting Yu, Nagiza F. Samatova
Adaptive Request Scheduling for Parallel Scientific Web Services. SSDBM (2008)
Pavan Balaji, Wu-chun Feng, Jeremy S. Archuleta, Heshan Lin, Rajkumar Kettimuthu, Rajeev Thakur, Xiaosong Ma
Semantics-based distributed I/O for mpiBLAST. PPOPP (2008)
Pavan Balaji, Wu-chun Feng, Heshan Lin
Semantic-based distributed i/o with the paramedic framework. HPDC (2008)
Oystein Thorsen, Brian E. Smith, Carlos P. Sosa, Karl Jiang, Heshan Lin, Amanda E. Peters, Wu-chun Feng
Parallel genomic sequence-search on a massively parallel system. Conf. Computing Frontiers (2007)
Mark K. Gardner, Wu-chun Feng, Jeremy S. Archuleta, Heshan Lin, Xiaosong Ma
Grid applications - Parallel genomic sequence-searching on an ad-hoc grid: experiences, lessons learned, and implications. SC (2006)
Avery Ching, Wu-chun Feng, Heshan Lin, Xiaosong Ma, Alok N. Choudhary
Exploring I/O Strategies for Parallel Sequence-Search Tools with S3aSim. HPDC (2006)
Heshan Lin, Xiaosong Ma, Praveen Chandramohan, Al Geist, Nagiza F. Samatova
Efficient Data Access for Parallel BLAST. IPDPS (2005)