Haodi Feng

Publication Activity (10 Years)

Years Active: 2001-2024
Publications (10 Years): 22

Top Topics

Linear Programming

Top Venues

IEEE ACM Trans. Comput. Biol. Bioinform.

Theor. Comput. Sci.

Publications

Aizhong Zhou, Haodi Feng, Jiong Guo, Haitao Jiang, Nan Liu, Binhai Zhu, Daming Zhu
New approximation algorithms for RNA secondary structures prediction problems by local search. Theor. Comput. Sci. 988 (2024)
Yu Zhang, Yang Zhou, Haodi Feng, Daming Zhu
FOKHic: A Framework of ${\varvec{k}}$-mer Based Hierarchical Classification. ICIC (LNAI 6) (2024)
Yuyang Wang, Haitao Jiang, Haodi Feng, Daming Zhu
Minimize Maximum Coverage of Fragment Alignment Selection. BIBM (2023)
Shengjun Xie, Haodi Feng, Haitao Jiang, Daming Zhu
Approximation algorithms for sorting by bounded singleton moves. Theor. Comput. Sci. 917 (2022)
Tiantian Li, Daming Zhu, Haitao Jiang, Haodi Feng, Xuefeng Cui
Longest k-tuple Common Sub-Strings. BIBM (2022)
Jin Zhao, Haodi Feng, Daming Zhu, Yu Lin
MultiTrans: An Algorithm for Path Extraction Through Mixed Integer Linear Programming for Transcriptome Assembly. IEEE ACM Trans. Comput. Biol. Bioinform. 19 (1) (2022)
Yu Zhang, Chenchen Li, Haodi Feng, Daming Zhu
DLmeta: a deep learning method for metagenomic identification. BIBM (2022)
Chenchen Li, Jin Zhao, Haodi Feng, Daming Zhu
TransCoord: Genome-guided Transcripts Assembly by Coordinating Candidate Paths into Two-phased Linear Programming. BIBM (2021)
Shu Zhang, Daming Zhu, Haitao Jiang, Jiong Guo, Haodi Feng, Xiaowen Liu
Sorting a Permutation by Best Short Swaps. Algorithmica 83 (7) (2021)
Jin Zhao, Haodi Feng, Daming Zhu, Chi Zhang, Ying Xu
Corrections to "IsoTree: A New Framework for de novo Transcriptome Assembly from RNA-seq Reads". IEEE ACM Trans. Comput. Biol. Bioinform. 17 (6) (2020)
Jin Zhao, Haodi Feng, Daming Zhu, Chi Zhang, Ying Xu
IsoTree: A New Framework for de novo Transcriptome Assembly from RNA-seq Reads. IEEE ACM Trans. Comput. Biol. Bioinform. 17 (3) (2020)
Shengjun Xie, Haodi Feng, Haitao Jiang, Junfeng Luan, Daming Zhu
An Approximation Algorithm for Sorting by Bounded Singleton Moves. COCOON (2019)
Jin Zhao, Haodi Feng, Daming Zhu, Chi Zhang, Ying Xu
DTA-SiST: de novo transcriptome assembly by using simplified suffix trees. BMC Bioinform. (25) (2019)
Xingfu Li, Haodi Feng, Haitao Jiang, Binhai Zhu
Solving the maximum internal spanning tree problem on interval graphs in polynomial time. Theor. Comput. Sci. 734 (2018)
Huiqiang Jia, Haichao Wei, Daming Zhu, Ruizhi Wang, Haodi Feng, Xiangzhong Feng
PASA: Identifying More Credible Structural Variants of Hedou12. ICIC (1) (2018)
Jin Zhao, Haodi Feng, Daming Zhu, Chi Zhang, Ying Xu
DTAST: A Novel Radical Framework for de Novo Transcriptome Assembly Based on Suffix Trees. ICIC (1) (2018)
Shu Zhang, Daming Zhu, Haitao Jiang, Jingjing Ma, Jiong Guo, Haodi Feng
Can a permutation be sorted by best short swaps?. CPM (2018)
Shu Zhang, Ruizhi Wang, Daming Zhu, Haitao Jiang, Haodi Feng, Jiong Guo, Xiaowen Liu
The Longest Common Exemplar Subsequence Problem. BIBM (2018)
Aizhong Zhou, Haitao Jiang, Jiong Guo, Haodi Feng, Nan Liu, Binhai Zhu
Improved Approximation Algorithm for the Maximum Base Pair Stackings Problem in RNA Secondary Structures Prediction. COCOON (2017)
Jin Zhao, Haodi Feng, Daming Zhu, Chi Zhang, Ying Xu
IsoTree: De Novo Transcriptome Assembly from RNA-Seq Reads - (Extended Abstract). ISBRA (2017)
Jin Zhao, Haodi Feng
Estimating isoform abundance by Particle Swarm Optimization. BIBM (2016)
Xingfu Li, Haodi Feng, Haitao Jiang, Binhai Zhu
A Polynomial Time Algorithm for Finding a Spanning Tree with Maximum Number of Internal Vertices on Interval Graphs. FAW (2016)
Haitao Jiang, Haodi Feng, Daming Zhu
An 5/4-Approximation Algorithm for Sorting Permutations by Short Block Moves. ISAAC (2014)
Shenpeng Lu, Haodi Feng, Xiuqian Li
Minimizing the makespan on a single parallel batching machine. Theor. Comput. Sci. 411 (7-9) (2010)
Haodi Feng, Hong Liu
Minimizing Makespan on an Unbounded Parallel Batch Processor with Rejection and Release Times. CSIE (2) (2009)
Hong Liu, Haodi Feng, Daming Zhu
Parameterized Complexity of Finding Elementary Modes in Metabolic Networks. IJCBS (2009)
Hong Liu, Haodi Feng, Daming Zhu, Junfeng Luan
Parameterized computational complexity of control problems in voting systems. Theor. Comput. Sci. 410 (27-29) (2009)
Zhaofeng Su, Hongze Qiu, Daming Zhu, Haodi Feng
New Evolutionary Subset: Application to Symbiotic Evolutionary Algorithm for Job-Shop Scheduling Problem. ICNC (1) (2008)
Hong Liu, Haodi Feng, Daming Zhu
Prediction of Protein Subcellular Locations by Combining K-Local Hyperplane Distance Nearest Neighbor. ADMA (2007)
Xiaotie Deng, Haodi Feng, Guojun Li, Benyun Shi
A PTAS for Semiconductor Burn-in Scheduling. J. Comb. Optim. 9 (1) (2005)
Haodi Feng, Kang Chen, Xiaotie Deng, Weimin Zheng
Accessor Variety Criteria for Chinese Word Extraction. Comput. Linguistics 30 (1) (2004)
Haodi Feng, Kang Chen, Chunyu Kit, Xiaotie Deng
Unsupervised Segmentation of Chinese Corpus Using Accessor Variety. IJCNLP (2004)
Xiaotie Deng, Haodi Feng, Pixing Zhang, Yuzhong Zhang, Hong Zhu
Minimizing Mean Completion Time in a Batch Processing System. Algorithmica 38 (4) (2004)
Haodi Feng, Guizhen Liu
Orthogonal factorizations of graphs. J. Graph Theory 40 (4) (2002)
Xiaotie Deng, Haodi Feng, Guojun Li, Guizhen Liu
A PTAS for Minimizing Total Completion Time of Bounded Batch Scheduling. Int. J. Found. Comput. Sci. 13 (6) (2002)
Mao-cheng Cai, Xiaotie Deng, Haodi Feng, Guojun Li, Guizhen Liu
A PTAS for Minimizing Total Completion Time of Bounded Batch Scheduling. IPCO (2002)
Kang Chen, Weimin Zheng, Xiaotie Deng, Haodi Feng, Shanfeng Zhu
Text Distinguishers Used in an Interactive Meta Search Engine. WAIM (2002)
Haodi Feng
(g, f)-Factorizations Orthogonal to k Subgraphs. WG (2001)
Xiaotie Deng, Haodi Feng, Pixing Zhang, Hong Zhu
A Polynomial Time Approximation Scheme for Minimizing Total Completion Time of Unbounded Batch Scheduling. ISAAC (2001)
Haodi Feng
Some Results on Orthogonal Factorizations. COCOON (2001)
Kang Chen, Weimin Zheng, Hung Chim, Xiaotie Deng, Haodi Feng, Shanfeng Zhu
On-Line Selection Of Distinguishing Elements For Focused Information Retrieval. ICME (2001)