Hai-Cheng Yi

Publication Activity (10 Years)

Years Active: 2019-2024
Publications (10 Years): 24

Top Topics

Ensemble Learning

Protein Interaction

Graph Embedding

Top Venues

IEEE ACM Trans. Comput. Biol. Bioinform.

Publications

Yu Li, Zhu-Hong You, Shu-Min Wang, Chenggang Mi, Mei-Neng Wang, Yu-An Huang, Hai-Cheng Yi
Attention-Based Learning for Predicting Drug-Drug Interactions in Knowledge Graph Embedding Based on Multisource Fusion Information. Int. J. Intell. Syst. 2024 (2024)
Lin-Xuan Hou, Hai-Cheng Yi, Zhu-Hong You, Shi-Hong Chen, Jia Zheng, Chee Keong Kwoh
MathEagle: Accurate prediction of drug-drug interaction events via multi-head attention and heterogeneous attribute graph learning. Comput. Biol. Medicine 177 (2024)
Xiao-Rui Su, Pengwei Hu, Hai-Cheng Yi, Zhuhong You, Lun Hu
Predicting Drug-Target Interactions Over Heterogeneous Information Network. IEEE J. Biomed. Health Informatics 27 (1) (2023)
Hai-Cheng Yi, Zhu-Hong You, De-Shuang Huang, Chee Keong Kwoh
Graph representation learning in bioinformatics: trends, methods and applications. Briefings Bioinform. 23 (1) (2022)
Long Yang, Li-Ping Li, Hai-Cheng Yi
DeepWalk based method to predict lncRNA-miRNA associations via lncRNA-miRNA-disease-protein-drug graph. BMC Bioinform. (12) (2022)
Xiao-Rui Su, Zhu-Hong You, Zhan-Heng Chen, Hai-Cheng Yi, Zhen-Hao Guo
Protein-Protein Interaction Prediction by Integrating Sequence Information and Heterogeneous Network Representation. ICIC (3) (2021)
Xiao-Rui Su, Zhu-Hong You, Hai-Cheng Yi, Bo-Wei Zhao
Detection of Drug-Drug Interactions Through Knowledge Graph Integrating Multi-attention with Capsule Network. ICIC (3) (2021)
Hai-Cheng Yi, Zhu-Hong You, Lei Wang, Xiao-Rui Su, Xi Zhou, Tong-Hai Jiang
In silico drug repositioning using deep learning and comprehensive similarity measures. BMC Bioinform. (3) (2021)
Zhen-Hao Guo, Zhu-Hong You, De-Shuang Huang, Hai-Cheng Yi, Kai Zheng, Zhan-Heng Chen, Yan-Bin Wang
MeSHHeading2vec: a new method for representing MeSH headings as vectors based on graph embedding algorithm. Briefings Bioinform. 22 (2) (2021)
Hai-Cheng Yi, Zhu-Hong You, Zhen-Hao Guo, De-Shuang Huang, Keith C. C. Chan
Learning Representation of Molecules in Association Network for Predicting Intermolecular Associations. IEEE ACM Trans. Comput. Biol. Bioinform. 18 (6) (2021)
Zhen-Hao Guo, Zhan-Heng Chen, Zhu-Hong You, Yan-Bin Wang, Hai-Cheng Yi, Mei-Neng Wang
A learning-based method to predict LncRNA-disease associations by combining CNN and ELM. BMC Bioinform. (5) (2021)
Zhen-Hao Guo, Zhu-Hong You, Li-Ping Li, Zhan-Heng Chen, Hai-Cheng Yi, Yan-Bin Wang
Inferring Drug-miRNA Associations by Integrating Drug SMILES and MiRNA Sequence Information. ICIC (2) (2020)
Xiao-Rui Su, Zhu-Hong You, Ji-Ren Zhou, Hai-Cheng Yi, Xiao Li
A Novel Computational Approach for Predicting Drug-Target Interactions via Network Representation Learning. ICIC (2) (2020)
Xiao-Rui Su, Zhuhong You, Hai-Cheng Yi
Prediction of LncRNA-Disease Associations Based on Network Representation Learning. BIBM (2020)
Hai-Cheng Yi, Zhu-Hong You, Xiao-Rui Su, De-Shuang Huang, Zhen-Hao Guo
A Unified Deep Biological Sequence Representation Learning with Pretrained Encoder-Decoder Model. ICIC (2) (2020)
Ping Zhang, Bo-Wei Zhao, Leon Wong, Zhu-Hong You, Zhen-Hao Guo, Hai-Cheng Yi
A Novel Computational Method for Predicting LncRNA-Disease Associations from Heterogeneous Information Network with SDNE Embedding Model. ICIC (2) (2020)
Bo-Ya Ji, Zhu-Hong You, Zhan-Heng Chen, Leon Wong, Hai-Cheng Yi
NEMPD: a network embedding-based method for predicting miRNA-disease associations by preserving behavior and attribute information. BMC Bioinform. 21 (1) (2020)
Zhan-Heng Chen, Zhu-Hong You, Zhen-Hao Guo, Hai-Cheng Yi, Gong-Xu Luo, Yan-Bin Wang
Predicting Drug-Target Interactions by Node2vec Node Embedding in Molecular Associations Network. ICIC (2) (2020)
Hai-Cheng Yi, Zhu-Hong You, Mei-Neng Wang, Zhen-Hao Guo, Yan-Bin Wang, Ji-Ren Zhou
RPI-SE: a stacking ensemble learning framework for ncRNA-protein interactions prediction using sequence information. BMC Bioinform. 21 (1) (2020)
Jianqiang Li, Xiaofeng Shi, Zhu-Hong You, Hai-Cheng Yi, Zhuangzhuang Chen, Qiuzhen Lin, Min Fang
Using Weighted Extreme Learning Machine Combined With Scale-Invariant Feature Transform to Predict Protein-Protein Interactions From Protein Evolutionary Information. IEEE ACM Trans. Comput. Biol. Bioinform. 17 (5) (2020)
Yan-Bin Wang, Zhu-Hong You, Shan Yang, Hai-Cheng Yi, Zhan-Heng Chen, Kai Zheng
A deep learning-based method for drug-target interaction prediction based on long short-term memory neural network. BMC Medical Informatics Decis. Mak. (2) (2020)
Hai-Cheng Yi, Zhu-Hong You, Yan-Bin Wang, Zhan-Heng Chen, Zhen-Hao Guo, Hui-Juan Zhu
In Silico Identification of Anticancer Peptides with Stacking Heterogeneous Ensemble Learning Model and Sequence Information. ICIC (2) (2019)
Tao Wang, Hai-Cheng Yi, Zhu-Hong You, Li-Ping Li, Yan-Bin Wang, Lun Hu, Leon Wong
A Gated Recurrent Unit Model for Drug Repositioning by Combining Comprehensive Similarity Measures and Gaussian Interaction Profile Kernel. ICIC (2) (2019)
Yan-Bin Wang, Zhu-Hong You, Hai-Cheng Yi, Zhan-Heng Chen, Zhen-Hao Guo, Kai Zheng
Combining Evolutionary Information and Sparse Bayesian Probability Model to Accurately Predict Self-interacting Proteins. ICIC (2) (2019)