Xiao-Rui Su

Publication Activity (10 Years)

Years Active: 2020-2024
Publications (10 Years): 25

Top Topics

Information Networks

Protein Interaction

Graph Representation

Top Venues

Briefings Bioinform.

Publications

Bo-Wei Zhao, Lei Wang, Peng-Wei Hu, Leon Wong, Xiao-Rui Su, Bao-Quan Wang, Zhu-Hong You, Lun Hu
Fusing Higher and Lower-Order Biological Information for Drug Repositioning via Graph Representation Learning. IEEE Trans. Emerg. Top. Comput. 12 (1) (2024)
Bo-Wei Zhao, Yi-Zhou He, Xiao-Rui Su, Yue Yang, Guo-Dong Li, Yu-An Huang, Peng-Wei Hu, Zhu-Hong You, Lun Hu
Motif-Aware miRNA-Disease Association Prediction via Hierarchical Attention Network. IEEE J. Biomed. Health Informatics 28 (7) (2024)
Bo-Wei Zhao, Xiao-Rui Su, Peng-Wei Hu, Yu-An Huang, Zhu-Hong You, Lun Hu
iGRLDTI: an improved graph representation learning method for predicting drug-target interactions over heterogeneous biological information network. Bioinform. 39 (8) (2023)
Xiao-Rui Su, Pengwei Hu, Hai-Cheng Yi, Zhuhong You, Lun Hu
Predicting Drug-Target Interactions Over Heterogeneous Information Network. IEEE J. Biomed. Health Informatics 27 (1) (2023)
Dong-Xu Li, Peng Zhou, Bo-Wei Zhao, Xiao-Rui Su, Guo-Dong Li, Jun Zhang, Peng-Wei Hu, Lun Hu
Biocaiv: an integrative webserver for motif-based clustering analysis and interactive visualization of biological networks. BMC Bioinform. 24 (1) (2023)
Dong-Xu Li, Xun Deng, Bo-Wei Zhao, Xiao-Rui Su, Guo-Dong Li, Zhu-Hong You, Peng-Wei Hu, Lun Hu
A Novel Graph Representation Learning Model for Drug Repositioning Using Graph Transition Probability Matrix Over Heterogenous Information Networks. ICIC (3) (2023)
Bo-Wei Zhao, Xiao-Rui Su, Yue Yang, Dong-Xu Li, Peng-Wei Hu, Zhu-Hong You, Lun Hu
Multi-level Subgraph Representation Learning for Drug-Disease Association Prediction Over Heterogeneous Biological Information Network. ICIC (3) (2023)
Yi-Zhou He, Yue Yang, Xiao-Rui Su, Bo-Wei Zhao, Shengwu Xiong, Lun Hu
Incorporating higher order network structures to improve miRNA-disease association prediction based on functional modularity. Briefings Bioinform. 24 (1) (2023)
Bo-Wei Zhao, Lun Hu, Pengwei Hu, Zhu-Hong You, Xiao-Rui Su, Dong-Xu Li, Zhan-Heng Chen, Ping Zhang
MRLDTI: A Meta-path-Based Representation Learning Model for Drug-Target Interaction Prediction. ICIC (2) (2022)
Xiao-Rui Su, Lun Hu, Zhuhong You, Pengwei Hu, Bo-Wei Zhao
Attention-based Knowledge Graph Representation Learning for Predicting Drug-drug Interactions. Briefings Bioinform. 23 (3) (2022)
Xiao-Rui Su, Lun Hu, Zhuhong You, Pengwei Hu, Lei Wang, Bo-Wei Zhao
A deep learning method for repurposing antiviral drugs against new viruses via multi-view nonnegative matrix factorization and its application to SARS-CoV-2. Briefings Bioinform. 23 (1) (2022)
Xiao-Rui Su, Lun Hu, Zhu-Hong You, Pengwei Hu, Bo-Wei Zhao
Multi-view heterogeneous molecular network representation learning for protein-protein interaction prediction. BMC Bioinform. 23 (1) (2022)
Bo-Wei Zhao, Lun Hu, Zhu-Hong You, Lei Wang, Xiao-Rui Su
HINGRL: predicting drug-disease associations with graph representation learning on heterogeneous information networks. Briefings Bioinform. 23 (1) (2022)
Menglong Zhang, Bo-Wei Zhao, Xiao-Rui Su, Yi-Zhou He, Yue Yang, Lun Hu
RLFDDA: a meta-path based graph representation learning model for drug-disease association prediction. BMC Bioinform. 23 (1) (2022)
Bo-Wei Zhao, Xiao-Rui Su, Peng-Wei Hu, Yu-Peng Ma, Xi Zhou, Lun Hu
A geometric deep learning framework for drug repositioning over heterogeneous information networks. Briefings Bioinform. 23 (6) (2022)
Lei Wang, Leon Wong, Zheng-Wei Li, Yuan Huang, Xiao-Rui Su, Bo-Wei Zhao, Zhuhong You
A machine learning framework based on multi-source feature fusion for circRNA-disease association prediction. Briefings Bioinform. 23 (5) (2022)
Lei Wang, Leon Wong, Zhu-Hong You, De-Shuang Huang, Xiao-Rui Su, Bo-Wei Zhao
NSECDA: Natural Semantic Enhancement for CircRNA-Disease Association Prediction. IEEE J. Biomed. Health Informatics 26 (10) (2022)
Xiao-Rui Su, Zhu-Hong You, Zhan-Heng Chen, Hai-Cheng Yi, Zhen-Hao Guo
Protein-Protein Interaction Prediction by Integrating Sequence Information and Heterogeneous Network Representation. ICIC (3) (2021)
Xiao-Rui Su, Zhu-Hong You, Hai-Cheng Yi, Bo-Wei Zhao
Detection of Drug-Drug Interactions Through Knowledge Graph Integrating Multi-attention with Capsule Network. ICIC (3) (2021)
Hai-Cheng Yi, Zhu-Hong You, Lei Wang, Xiao-Rui Su, Xi Zhou, Tong-Hai Jiang
In silico drug repositioning using deep learning and comprehensive similarity measures. BMC Bioinform. (3) (2021)
Bo-Ya Ji, Zhu-Hong You, Lei Wang, Leon Wong, Xiao-Rui Su, Bo-Wei Zhao
Predicting miRNA-Disease Associations via a New MeSH Headings Representation of Diseases and eXtreme Gradient Boosting. ICIC (3) (2021)
Xiao-Rui Su, Zhuhong You, Lei Wang, Lun Hu, Leon Wong, Boya Ji, Bo-Wei Zhao
SANE: A sequence combined attentive network embedding model for COVID-19 drug repositioning. Appl. Soft Comput. 111 (2021)
Xiao-Rui Su, Zhu-Hong You, Ji-Ren Zhou, Hai-Cheng Yi, Xiao Li
A Novel Computational Approach for Predicting Drug-Target Interactions via Network Representation Learning. ICIC (2) (2020)
Xiao-Rui Su, Zhuhong You, Hai-Cheng Yi
Prediction of LncRNA-Disease Associations Based on Network Representation Learning. BIBM (2020)
Hai-Cheng Yi, Zhu-Hong You, Xiao-Rui Su, De-Shuang Huang, Zhen-Hao Guo
A Unified Deep Biological Sequence Representation Learning with Pretrained Encoder-Decoder Model. ICIC (2) (2020)