Guangchuang Yu

Publication Activity (10 Years)

Years Active: 2009-2024
Publications (10 Years): 9

Top Topics

Nucleotide Sequences

Hierarchically Structured

Semantically Rich

Top Venues

Briefings Bioinform.

PLoS Comput. Biol.

Publications

Yongtao Ye, Marcus H. Shum, Joseph L. Tsui, Guangchuang Yu, David K. Smith, Huachen Zhu, Joseph T. Wu, Yi Guan, Tommy Tsan-Yuk Lam
Robust expansion of phylogeny for fast-growing genome sequence data. PLoS Comput. Biol. 20 (2) (2024)
Noriaki Sato, Yoshinori Tamada, Guangchuang Yu, Yasushi Okuno
: Bayesian network plots for enrichment analysis. Bioinform. 38 (10) (2022)
Lang Zhou, Tingze Feng, Shuangbin Xu, Fangluan Gao, Tommy T. Lam, Qianwen Wang, Tianzhi Wu, Huina Huang, Li Zhan, Lin Li, Yi Guan, Zehan Dai, Guangchuang Yu
ggmsa: a visual exploration tool for multiple sequence alignment and associated data. Briefings Bioinform. 23 (4) (2022)
Zhaodong Hao, Dekang Lv, Ying Ge, Jisen Shi, Dolf Weijers, Guangchuang Yu, Jinhui Chen
: drawing SVG graphics to visualize and map genome-wide data on the idiograms. PeerJ Comput. Sci. 6 (2020)
Ruizhu Huang, Charlotte Soneson, Felix G. M. Ernst, Kevin C. Rue-Albrecht, Guangchuang Yu, Stephanie C. Hicks, Mark D. Robinson
TreeSummarizedExperiment: a S4 class for data with hierarchical structure. F1000Research 9 (2020)
Zhaodong Hao, Dekang Lv, Ying Ge, Jisen Shi, Dolf Weijers, Guangchuang Yu, Jinhui Chen
: drawing SVG graphics to visualize and map genome-wide data on the idiograms. PeerJ Prepr. 7 (2019)
Guangchuang Yu
Using meshes for MeSH term enrichment and semantic analyses. Bioinform. 34 (21) (2018)
Guangchuang Yu, Li-Gen Wang, Guang-Rong Yan, Qing-Yu He
DOSE: an R/Bioconductor package for disease ontology semantic and enrichment analysis. Bioinform. 31 (4) (2015)
Guangchuang Yu, Li-Gen Wang, Qing-Yu He
ChIPseeker: an R/Bioconductor package for ChIP peak annotation, comparison and visualization. Bioinform. 31 (14) (2015)
Guangchuang Yu, Qing-Yu He
Functional similarity analysis of human virus-encoded miRNAs. J. Clin. Bioinform. 1 (2011)
Guangchuang Yu, Fei Li, Yide Qin, Xiaochen Bo, Yibo Wu, Shengqi Wang
GOSemSim: an R package for measuring semantic similarity among GO terms and gene products. Bioinform. 26 (7) (2010)
Fei Li, Yuxing Peng, Wenjian Xu, Guangchuang Yu, Peng Li, Xiaochen Bo, Shengqi Wang
Towards a Comprehensive HBV-Human Interaction Map. IJCBS (2009)