Eileen E. M. Furlong

Publication Activity (10 Years)

Years Active: 2007-2017
Publications (10 Years): 3

Top Topics

Spatial And Temporal

Automatic Selection

Causal Reasoning

Quantitative And Qualitative

Top Venues

PLoS Comput. Biol.

Publications

Matthias Monfort, Eileen E. M. Furlong, Charles Girardot
Dynamix: dynamic visualization by automatic selection of informative tracks from hundreds of genomic datasets. Bioinform. 33 (14) (2017)
Charles Girardot, Jelle Scholtalbers, Sajoscha Sauer, Shu-Yi Su, Eileen E. M. Furlong
Je, a versatile suite to handle multiplexed NGS libraries with unique molecular identifiers. BMC Bioinform. 17 (2016)
Abibatou Mbodj, Eleanor Hilary Gustafson, Lucia Ciglar, Guillaume Junion, Aitor González, Charles Girardot, Laurent Perrin, Eileen E. M. Furlong, Denis Thieffry
Qualitative Dynamical Modelling Can Formally Explain Mesoderm Specification and Predict Novel Developmental Phenotypes. PLoS Comput. Biol. 12 (9) (2016)
Felix A. Klein, Tibor Pakozdi, Simon Anders, Yad Ghavi-Helm, Eileen E. M. Furlong, Wolfgang Huber
FourCSeq: analysis of 4C sequencing data. Bioinform. 31 (19) (2015)
Nicolas Delhomme, Ismaël Padioleau, Eileen E. M. Furlong, Lars M. Steinmetz
easyRNASeq: a bioconductor package for processing RNA-Seq data. Bioinform. 28 (19) (2012)
Bartek Wilczynski, Ya-Hsin Liu, Zhen Xuan Yeo, Eileen E. M. Furlong
Predicting Spatial and Temporal Gene Expression Using an Integrative Model of Transcription Factor Occupancy and Chromatin State. PLoS Comput. Biol. 8 (12) (2012)
Antti Honkela, Charles Girardot, Eleanor Hilary Gustafson, Ya-Hsin Liu, Eileen E. M. Furlong, Neil D. Lawrence, Magnus Rattray
Model-based method for transcription factor target identification with limited data. Proc. Natl. Acad. Sci. USA 107 (17) (2010)
Yannick Haudry, Chuang Kee Ong, Laurence Ettwiller, Hugo Bérubé, Ivica Letunic, Misha Kapushesky, Paul-Daniel Weeber, Xi Wang, Julien Gagneur, Charles Girardot, Detlev Arendt, Peer Bork, Alvis Brazma, Eileen E. M. Furlong, Joachim Wittbrodt, Thorsten Henrich
Comparing and Analysing Gene Expression Patterns Across Animal Species Using 4DXpress. APBC (2008)
Yannick Haudry, Hugo Bérubé, Ivica Letunic, Paul-Daniel Weeber, Julien Gagneur, Charles Girardot, Misha Kapushesky, Detlev Arendt, Peer Bork, Alvis Brazma, Eileen E. M. Furlong, Joachim Wittbrodt, Thorsten Henrich
: a database for cross-species expression pattern comparisons. Nucleic Acids Res. 36 (Database-Issue) (2008)
Charles Girardot, Oleg Sklyar, Sophie Grosz, Wolfgang Huber, Eileen E. M. Furlong
CoCo: a web application to display, store and curate ChIP-on-chip data integrated with diverse types of gene expression data. Bioinform. 23 (6) (2007)