Drew F. K. Williamson

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 34

Top Topics

Delaunay Triangulations

Multiple Instance

Survival Prediction

Weakly Supervised

Top Venues

J. Open Source Softw.

Medical Image Anal.

IEEE Trans. Medical Imaging

Publications

Andrew H. Song, Richard J. Chen, Tong Ding, Drew F. K. Williamson, Guillaume Jaume, Faisal Mahmood
Morphological Prototyping for Unsupervised Slide Representation Learning in Computational Pathology. CoRR (2024)
Guillaume Jaume, Paul Doucet, Andrew H. Song, Ming Y. Lu, Cristina Almagro-Pérez, Sophia J. Wagner, Anurag J. Vaidya, Richard J. Chen, Drew F. K. Williamson, Ahrong Kim, Faisal Mahmood
HEST-1k: A Dataset for Spatial Transcriptomics and Histology Image Analysis. CoRR (2024)
Sanghoon Lee, Kazi Aminul Islam, Sai Chandana Koganti, Varshini Yaganti, Sai Ramya Sri Mamillapalli, Hannah Vitalos, Drew F. K. Williamson
SN-FPN: Self-Attention Nested Feature Pyramid Network for Digital Pathology Image Segmentation. IEEE Access 12 (2024)
Andrew H. Song, Guillaume Jaume, Drew F. K. Williamson, Ming Y. Lu, Anurag Vaidya, Tiffany R. Miller, Faisal Mahmood
Artificial Intelligence for Digital and Computational Pathology. CoRR (2024)
Guillaume Jaume, Lukas Oldenburg, Anurag Vaidya, Richard J. Chen, Drew F. K. Williamson, Thomas Peeters, Andrew H. Song, Faisal Mahmood
Transcriptomics-guided Slide Representation Learning in Computational Pathology. CoRR (2024)
Ming Y. Lu, Bowen Chen, Andrew Zhang, Drew F. K. Williamson, Richard J. Chen, Tong Ding, Long Phi Le, Yung-Sung Chuang, Faisal Mahmood
Visual Language Pretrained Multiple Instance Zero-Shot Transfer for Histopathology Images. CoRR (2023)
Guillaume Jaume, Anurag Vaidya, Richard J. Chen, Drew F. K. Williamson, Paul Pu Liang, Faisal Mahmood
Modeling Dense Multimodal Interactions Between Biological Pathways and Histology for Survival Prediction. CoRR (2023)
Andrew H. Song, Mane Williams, Drew F. K. Williamson, Guillaume Jaume, Andrew Zhang, Bowen Chen, Robert Serafin, Jonathan T. C. Liu, Alexander S. Baras, Anil V. Parwani, Faisal Mahmood
Weakly Supervised AI for Efficient Analysis of 3D Pathology Samples. CoRR (2023)
Ming Y. Lu, Bowen Chen, Drew F. K. Williamson, Richard J. Chen, Ivy Liang, Tong Ding, Guillaume Jaume, Igor Odintsov, Andrew Zhang, Long Phi Le, Georg Gerber, Anil V. Parwani, Faisal Mahmood
Towards a Visual-Language Foundation Model for Computational Pathology. CoRR (2023)
Richard J. Chen, Tong Ding, Ming Y. Lu, Drew F. K. Williamson, Guillaume Jaume, Bowen Chen, Andrew Zhang, Daniel Shao, Andrew H. Song, Muhammad Shaban, Mane Williams, Anurag Vaidya, Sharifa Sahai, Lukas Oldenburg, Luca L. Weishaupt, Judy J. Wang, Walt Williams, Long Phi Le, Georg Gerber, Faisal Mahmood
A General-Purpose Self-Supervised Model for Computational Pathology. CoRR (2023)
Ming Y. Lu, Bowen Chen, Drew F. K. Williamson, Richard J. Chen, Kenji Ikamura, Georg Gerber, Ivy Liang, Long Phi Le, Tong Ding, Anil V. Parwani, Faisal Mahmood
A Foundational Multimodal Vision Language AI Assistant for Human Pathology. CoRR (2023)
Ming Y. Lu, Bowen Chen, Andrew Zhang, Drew F. K. Williamson, Richard J. Chen, Tong Ding, Long Phi Le, Yung-Sung Chuang, Faisal Mahmood
Visual Language Pretrained Multiple Instance Zero-Shot Transfer for Histopathology Images. CVPR (2023)
Richard J. Chen, Ming Y. Lu, Jingwen Wang, Drew F. K. Williamson, Scott J. Rodig, Neal I. Lindeman, Faisal Mahmood
Pathomic Fusion: An Integrated Framework for Fusing Histopathology and Genomic Features for Cancer Diagnosis and Prognosis. IEEE Trans. Medical Imaging 41 (4) (2022)
Iain Carmichael, Andrew H. Song, Richard J. Chen, Drew F. K. Williamson, Tiffany Y. Chen, Faisal Mahmood
Incorporating Intratumoral Heterogeneity into Weakly-Supervised Deep Learning Models via Variance Pooling. MICCAI (2) (2022)
Kevin Thandiackal, Boqi Chen, Pushpak Pati, Guillaume Jaume, Drew F. K. Williamson, Maria Gabrani, Orcun Goksel
Differentiable Zooming for Multiple Instance Learning on Whole-Slide Images. ECCV (21) (2022)
Iain Carmichael, Andrew H. Song, Richard J. Chen, Drew F. K. Williamson, Tiffany Y. Chen, Faisal Mahmood
Incorporating intratumoral heterogeneity into weakly-supervised deep learning models via variance pooling. CoRR (2022)
Kevin Thandiackal, Boqi Chen, Pushpak Pati, Guillaume Jaume, Drew F. K. Williamson, Maria Gabrani, Orcun Goksel
Differentiable Zooming for Multiple Instance Learning on Whole-Slide Images. CoRR (2022)
Jochen K. Lennerz, Ursula Green, Drew F. K. Williamson, Faisal Mahmood
A unifying force for the realization of medical AI. npj Digit. Medicine 5 (2022)
Ming Y. Lu, Richard J. Chen, Dehan Kong, Jana Lipková, Rajendra Singh, Drew F. K. Williamson, Tiffany Y. Chen, Faisal Mahmood
Federated learning for computational pathology on gigapixel whole slide images. Medical Image Anal. 76 (2022)
Richard J. Chen, Ming Y. Lu, Drew F. K. Williamson, Tiffany Y. Chen, Jana Lipková, Muhammad Shaban, Maha Shady, Mane Williams, Bumjin Joo, Zahra Noor, Faisal Mahmood
Pan-Cancer Integrative Histology-Genomic Analysis via Interpretable Multimodal Deep Learning. CoRR (2021)
Richard J. Chen, Ming Y. Lu, Muhammad Shaban, Chengkuan Chen, Tiffany Y. Chen, Drew F. K. Williamson, Faisal Mahmood
Whole Slide Images are 2D Point Clouds: Context-Aware Survival Prediction using Patch-based Graph Convolutional Networks. CoRR (2021)
Richard J. Chen, Tiffany Y. Chen, Jana Lipková, Judy J. Wang, Drew F. K. Williamson, Ming Y. Lu, Sharifa Sahai, Faisal Mahmood
Algorithm Fairness in AI for Medicine and Healthcare. CoRR (2021)
Kutsev Bengisu Ozyoruk, Sermet Can, Guliz Irem Gokceler, Kayhan Basak, Derya Demir, Gurdeniz Serin, Uguray Payam Hacisalihoglu, Berkan Darbaz, Ming Y. Lu, Tiffany Y. Chen, Drew F. K. Williamson, Funda Yilmaz, Faisal Mahmood, Mehmet Turan
Deep Learning-based Frozen Section to FFPE Translation. CoRR (2021)
Richard J. Chen, Ming Y. Lu, Muhammad Shaban, Chengkuan Chen, Tiffany Y. Chen, Drew F. K. Williamson, Faisal Mahmood
Whole Slide Images are 2D Point Clouds: Context-Aware Survival Prediction Using Patch-Based Graph Convolutional Networks. MICCAI (8) (2021)
Chengkuan Chen, Ming Y. Lu, Drew F. K. Williamson, Tiffany Y. Chen, Andrew J. Schaumberg, Faisal Mahmood
Fast and Scalable Image Search For Histology. CoRR (2021)
Richard J. Chen, Ming Y. Lu, Wei-Hung Weng, Tiffany Y. Chen, Drew F. K. Williamson, Trevor Manz, Maha Shady, Faisal Mahmood
Multimodal Co-Attention Transformer for Survival Prediction in Gigapixel Whole Slide Images. ICCV (2021)
Ming Y. Lu, Tiffany Y. Chen, Drew F. K. Williamson, Melissa Zhao, Maha Shady, Jana Lipková, Faisal Mahmood
AI-based pathology predicts origins for cancers of unknown primary. Nat. 594 (7861) (2021)
Davis T. Weaver, Kathleen I. Pishas, Drew F. K. Williamson, Jessica Scarborough, Stephen L. Lessnick, Andrew Dhawan, Jacob G. Scott
Network potential identifies therapeutic miRNA cocktails in Ewing sarcoma. PLoS Comput. Biol. 17 (10) (2021)
Ming Y. Lu, Melissa Zhao, Maha Shady, Jana Lipková, Tiffany Y. Chen, Drew F. K. Williamson, Faisal Mahmood
Deep Learning-based Computational Pathology Predicts Origins for Cancers of Unknown Primary. CoRR (2020)
Ming Y. Lu, Drew F. K. Williamson, Tiffany Y. Chen, Richard J. Chen, Matteo Barbieri, Faisal Mahmood
Data Efficient and Weakly Supervised Computational Pathology on Whole Slide Images. CoRR (2020)
Ming Y. Lu, Dehan Kong, Jana Lipková, Richard J. Chen, Rajendra Singh, Drew F. K. Williamson, Tiffany Y. Chen, Faisal Mahmood
Federated Learning for Computational Pathology on Gigapixel Whole Slide Images. CoRR (2020)
Richard J. Chen, Ming Y. Lu, Jingwen Wang, Drew F. K. Williamson, Scott J. Rodig, Neal I. Lindeman, Faisal Mahmood
Pathomic Fusion: An Integrated Framework for Fusing Histopathology and Genomic Features for Cancer Diagnosis and Prognosis. CoRR (2019)
Raoul R. Wadhwa, Drew F. K. Williamson, Andrew Dhawan, James G. Scott
TDAstats: R pipeline for computing persistent homology in topological data analysis. J. Open Source Softw. 3 (28) (2018)
Inom Mirzaev, Drew F. K. Williamson, Jacob G. Scott
egtplot: A Python Package for Three-Strategy Evolutionary Games. J. Open Source Softw. 3 (26) (2018)