Dmitry Filimonov

Publication Activity (10 Years)

Years Active: 2005-2023
Publications (10 Years): 17

Top Topics

Wide Applicability

Scientific Publications

Chemical Compounds

Top Venues

J. Chem. Inf. Model.

J. Cheminformatics

J. Bioinform. Comput. Biol.

Publications

Anton S. Kolodnitsky, Nikita Ionov, Anastasia V. Rudik, Dmitry Filimonov, Vladimir Poroikov
HGMMX: Host Gut Microbiota Metabolism Xenobiotics Database. J. Chem. Inf. Model. 63 (21) (2023)
Nikita Ionov, Dmitry S. Druzhilovskiy, Dmitry Filimonov, Vladimir Poroikov
Phyto4Health: Database of Phytocomponents from Russian Pharmacopoeia Plants. J. Chem. Inf. Model. 63 (7) (2023)
Anton Zadorozhny, Anton Smirnov, Dmitry Filimonov, Alexey Lagunin
Prediction of pathogenic single amino acid substitutions using molecular fragment descriptors. Bioinform. 39 (8) (2023)
Dmitry A. Karasev, Boris Sobolev, Alexey Lagunin, Dmitry Filimonov, Vladimir Poroikov
The method predicting interaction between protein targets and small-molecular ligands with the wide applicability domain. Comput. Biol. Chem. 98 (2022)
Olga A. Tarasova, Anastasia V. Rudik, Nadezhda Yu. Biziukova, Dmitry Filimonov, Vladimir Poroikov
Chemical named entity recognition in the texts of scientific publications using the naïve Bayes classifier approach. J. Cheminformatics 14 (1) (2022)
Olga A. Tarasova, Nadezhda Yu. Biziukova, Anastassia V. Rudik, Alexander V. Dmitriev, Dmitry Filimonov, Vladimir Poroikov
Extraction of Data on Parent Compounds and Their Metabolites from Texts of Scientific Abstracts. J. Chem. Inf. Model. 61 (4) (2021)
Dmitry S. Druzhilovskiy, Leonid A. Stolbov, Polina I. Savosina, Pavel V. Pogodin, Dmitry Filimonov, Alexander V. Veselovsky, Karen Stefanisko, Nadya I. Tarasova, Marc C. Nicklaus, Vladimir Poroikov
Computational Approaches To Identify A Hidden Pharmacological Potential In Large Chemical Libraries. Supercomput. Front. Innov. 7 (3) (2020)
Leonid A. Stolbov, Dmitry S. Druzhilovskiy, Anastasia V. Rudik, Dmitry Filimonov, Vladimir Poroikov, Marc C. Nicklaus
AntiHIV-Pred: web-resource for in silico prediction of anti-HIV/AIDS activity. Bioinform. 36 (3) (2020)
Anastasiya V. Rudik, Vladislav M. Bezhentsev, Alexander V. Dmitriev, Alexey Lagunin, Dmitry Filimonov, Vladimir Poroikov
Metatox - Web application for generation of metabolic pathways and toxicity estimation. J. Bioinform. Comput. Biol. 17 (1) (2019)
Pavel V. Pogodin, Alexey Lagunin, Anastasia V. Rudik, Dmitry S. Druzhilovskiy, Dmitry Filimonov, Vladimir Poroikov
AntiBac-Pred: A Web Application for Predicting Antibacterial Activity of Chemical Compounds. J. Chem. Inf. Model. 59 (11) (2019)
Sergey Ivanov, Alexey Lagunin, Dmitry Filimonov, Vladimir Poroikov
Assessment of the cardiovascular adverse effects of drug-drug interactions through a combined analysis of spontaneous reports and predicted drug-target interactions. PLoS Comput. Biol. 15 (7) (2019)
Olga A. Tarasova, Nadezhda Yu. Biziukova, Dmitry Filimonov, Vladimir Poroikov, Marc C. Nicklaus
Data Mining Approach for Extraction of Useful Information About Biologically Active Compounds from Publications. J. Chem. Inf. Model. 59 (9) (2019)
Sergey Ivanov, Alexey Lagunin, Anastasia V. Rudik, Dmitry Filimonov, Vladimir Poroikov
ADVERPred-Web Service for Prediction of Adverse Effects of Drugs. J. Chem. Inf. Model. 58 (1) (2018)
Alexey Lagunin, Anastasia V. Rudik, Dmitry S. Druzhilovskiy, Dmitry Filimonov, Vladimir Poroikov
ROSC-Pred: web-service for rodent organ-specific carcinogenicity prediction. Bioinform. 34 (4) (2018)
Olga A. Tarasova, Dmitry Filimonov, Vladimir Poroikov
PASS-based approach to predict HIV-1 reverse transcriptase resistance. J. Bioinform. Comput. Biol. 15 (2) (2017)
Anastasia V. Rudik, Vladislav M. Bezhentsev, Alexander V. Dmitriev, Dmitry S. Druzhilovskiy, Alexey Lagunin, Dmitry Filimonov, Vladimir Poroikov
MetaTox: Web Application for Predicting Structure and Toxicity of Xenobiotics' Metabolites. J. Chem. Inf. Model. 57 (4) (2017)
Anastasia V. Rudik, Alexander V. Dmitriev, Alexey Lagunin, Dmitry Filimonov, Vladimir Poroikov
Prediction of reacting atoms for the major biotransformation reactions of organic xenobiotics. J. Cheminformatics 8 (1) (2016)
Olga A. Tarasova, Aleksandra F. Urusova, Dmitry Filimonov, Marc C. Nicklaus, Alexey V. Zakharov, Vladimir Poroikov
QSAR Modeling Using Large-Scale Databases: Case Study for HIV-1 Reverse Transcriptase Inhibitors. J. Chem. Inf. Model. 55 (7) (2015)
Anastasia V. Rudik, Alexander V. Dmitriev, Alexey Lagunin, Dmitry Filimonov, Vladimir Poroikov
prediction of sites of metabolism for drug-like compounds. Bioinform. 31 (12) (2015)
Anastasia V. Rudik, Alexander V. Dmitriev, Alexey Lagunin, Dmitry Filimonov, Vladimir Poroikov
Metabolism Site Prediction Based on Xenobiotic Structural Formulas and PASS Prediction Algorithm. J. Chem. Inf. Model. 54 (2) (2014)
Alexey Lagunin, Sergey Ivanov, Anastasia V. Rudik, Dmitry Filimonov, Vladimir Poroikov
prediction of drug-induced gene expression profiles based on structural formula. Bioinform. 29 (16) (2013)
Boris Sobolev, Dmitry Filimonov, Alexey Lagunin, Alexey V. Zakharov, Olga Koborova, Alexander E. Kel, Vladimir Poroikov
Functional classification of proteins based on projection of amino acid sequences: application for prediction of protein kinase substrates. BMC Bioinform. 11 (2010)
Barry J. Hardy, Nicki Douglas, Christoph Helma, Micha Rautenberg, Nina Jeliazkova, Vedrin Jeliazkov, Ivelina Nikolova, Romualdo Benigni, Olga Tcheremenskaia, Stefan Kramer, Tobias Girschick, Fabian Buchwald, Jörg Wicker, Andreas Karwath, Martin Gütlein, Andreas Maunz, Haralambos Sarimveis, Georgia Melagraki, Antreas Afantitis, Pantelis Sopasakis, David Gallagher, Vladimir Poroikov, Dmitry Filimonov, Alexey V. Zakharov, Alexey Lagunin, Tatyana Gloriozova, Sergey Novikov, Natalia Skvortsova, Dmitry S. Druzhilovskiy, Sunil Chawla, Indira Ghosh, Surajit Ray, Hitesh Patel, Sylvia Escher
Collaborative development of predictive toxicology applications. J. Cheminformatics 2 (2010)
Kirill Alexandrov, Boris Sobolev, Dmitry Filimonov, Vladimir Poroikov
Recognition of protein Function Using the Local Similarity. J. Bioinform. Comput. Biol. 6 (4) (2008)
Dmitry Filimonov, Vladimir Poroikov
Why relevant chemical information cannot be exchanged without disclosing structures. J. Comput. Aided Mol. Des. 19 (9-10) (2005)