Functional classification of proteins based on projection of amino acid sequences: application for prediction of protein kinase substrates.
Boris SobolevDmitry FilimonovAlexey LaguninAlexey V. ZakharovOlga KoborovaAlexander E. KelVladimir PoroikovPublished in: BMC Bioinform. (2010)
Keyphrases
- amino acid sequences
- predicting protein
- protein sequences
- protein function
- protein function prediction
- protein structure
- amino acids
- contact maps
- tertiary structure
- protein structure prediction
- protein tertiary structure
- protein classification
- secondary structure
- protein secondary structure
- protein chains
- molecular biology
- secondary structure prediction
- contact map
- subcellular localization
- protein functional
- protein protein interactions
- protein secondary structure prediction
- amino acid residues
- protein families
- physico chemical
- sequence analysis
- drug design
- protein interaction
- sequence alignment
- computational biology
- machine learning
- protein interaction data
- physicochemical properties
- coarse grained
- biological data
- protein folding
- gene expression profiles
- spatial structure
- computational methods
- feature selection
- graph theory
- sequence databases
- psi blast
- computational tools