Desi Shang

Publication Activity (10 Years)

Years Active: 2013-2023
Publications (10 Years): 7

Top Topics

Transcriptional Regulation

Gene Regulation

Biological Pathways

Top Venues

Briefings Bioinform.

J. Biomed. Informatics

Publications

Kunpeng Luo, Zhipeng Qian, Yanan Jiang, Dongxu Lv, Kaibin Zhu, Jing Shao, Ying Hu, Chengqian Lv, Qianqian Huang, Yang Gao, Shizhu Jin, Desi Shang
mutation and hypoxia. Comput. Biol. Medicine 163 (2023)
Jie Hu, Xiaozhi Zhang, Desi Shang, Lijun Ouyang, Yue Li, Dongping Xiong
EGTSyn: Edge-based Graph Transformer for Anti-Cancer Drug Combination Synergy Prediction. CoRR (2023)
Yongsan Yang, Fengcui Qian, Xuecang Li, Yanyu Li, Liwei Zhou, Qiuyu Wang, Xinyuan Zhou, Jian Zhang, Chao Song, Zhengmin Yu, Ting Cui, Chenchen Feng, Jiang Zhu, Desi Shang, Jiaqi Liu, Mengfei Sun, Yuexin Zhang, Huifang Tang, Chunquan Li
GREAP: a comprehensive enrichment analysis software for human genomic regions. Briefings Bioinform. 23 (5) (2022)
Yuexin Zhang, Chao Song, Yimeng Zhang, Yuezhu Wang, Chenchen Feng, Jiaxin Chen, Ling Wei, Qi Pan, Desi Shang, Yanbing Zhu, Jiang Zhu, Shuangsang Fang, Jun Zhao, Yongsan Yang, Xilong Zhao, Xiaozheng Xu, Qiuyu Wang, Jincheng Guo, Chunquan Li
TcoFBase: a comprehensive database for decoding the regulatory transcription co-factors in human and mouse. Nucleic Acids Res. 50 (D1) (2022)
Yanjun Xu, Tan Wu, Feng Li, Qun Dong, Jingwen Wang, Desi Shang, Yingqi Xu, Chunlong Zhang, Yiying Dou, Congxue Hu, Haixiu Yang, Xuan Zheng, Yunpeng Zhang, Lihua Wang, Xia Li
Identification and comprehensive characterization of lncRNAs with copy number variations and their driving transcriptional perturbed subpathways reveal functional significance for cancer. Briefings Bioinform. 21 (6) (2020)
Qun Dong, Feng Li, Yanjun Xu, Jing Xiao, Yingqi Xu, Desi Shang, Chunlong Zhang, Haixiu Yang, Zihan Tian, Kai Mi, Xia Li, Yunpeng Zhang
RNAactDrug: a comprehensive database of RNAs associated with drug sensitivity from multi-omics data. Briefings Bioinform. 21 (6) (2020)
Yanjun Xu, Haixiu Yang, Tan Wu, Qun Dong, Zeguo Sun, Desi Shang, Feng Li, Yingqi Xu, Fei Su, Siyao Liu, Yunpeng Zhang, Xia Li
BioM2MetDisease: a manually curated database for associations between microRNAs, metabolites, small molecules and metabolic diseases. Database J. Biol. Databases Curation 2017 (2017)
Jian Zhang, Yan Wang, Desi Shang, Fulong Yu, Wei Liu, Yan Zhang, Chenchen Feng, Qiuyu Wang, Yanjun Xu, Yuejuan Liu, Xuefeng Bai, Xuecang Li, Chunquan Li
Characterizing and optimizing human anticancer drug targets based on topological properties in the context of biological pathways. J. Biomed. Informatics 54 (2015)
Jing Li, Chunquan Li, Junwei Han, Chunlong Zhang, Desi Shang, Qianlan Yao, Yunpeng Zhang, Yanjun Xu, Wei Liu, Meng Zhou, Haixiu Yang, Fei Su, Xia Li
The detection of risk pathways, regulated by miRNAs, via the integration of sample-matched miRNA-mRNA profiles and pathway structure. J. Biomed. Informatics 49 (2014)
Ke-ning Li, Zi-hui Li, Ning Zhao, Yaoqun Xu, Yongjing Liu, Yuanshuai Zhou, Desi Shang, Fujun Qiu, Rui Zhang, Zhi-qiang Chang, Yan Xu
Functional analysis of microRNA and transcription factor synergistic regulatory network based on identifying regulatory motifs in non-small cell lung cancer. BMC Syst. Biol. 7 (2013)
Wei Liu, Chunquan Li, Yanjun Xu, Haixiu Yang, Qianlan Yao, Junwei Han, Desi Shang, Chunlong Zhang, Fei Su, Xiaoxi Li, Yun Xiao, Fan Zhang, Meng Dai, Xia Li
Topologically inferring risk-active pathways toward precise cancer classification by directed random walk. Bioinform. 29 (17) (2013)