David Murrugarra

Publication Activity (10 Years)

Years Active: 2010-2022
Publications (10 Years): 8

Top Topics

Gene Regulatory Networks

Uniform Distribution

Mathematical Modeling

Top Venues

Discret. Event Dyn. Syst.

EURASIP J. Bioinform. Syst. Biol.

Publications

Karthik Chandrasekhar, Claus Kadelka, Reinhard C. Laubenbacher, David Murrugarra
Stability of Linear Boolean Networks. CoRR (2022)
David Murrugarra, Alan Veliz-Cuba
An information theoretic approach for the inference of Boolean networks and functions from data: BoCSE. Patterns 3 (11) (2022)
Elena S. Dimitrova, Brandilyn Stigler, Claus Kadelka, David Murrugarra
Revealing the canalizing structure of Boolean functions: Algorithms and applications. Autom. 146 (2022)
David Murrugarra, Elena S. Dimitrova
Quantifying the total effect of edge interventions in discrete multistate networks. Autom. 125 (2021)
David J. Wooten, Jorge Gómez Tejeda Zañudo, David Murrugarra, Austin M. Perry, Anna Dongari-Bagtzoglou, Reinhard C. Laubenbacher, Clarissa J. Nobile, Réka Albert
Mathematical modeling of the Candida albicans yeast to hyphal transition reveals novel control strategies. PLoS Comput. Biol. 17 (3) (2021)
Elena S. Dimitrova, Brandilyn Stigler, Claus Kadelka, David Murrugarra
Revealing the canalizing structure of Boolean functions: Algorithms and applications. CoRR (2021)
David Murrugarra, Alan Veliz-Cuba, Boris Aguilar, Reinhard C. Laubenbacher
Identification of control targets in Boolean molecular network models via computational algebra. BMC Syst. Biol. 10 (2016)
David Murrugarra, Elena S. Dimitrova
Molecular network control through boolean canalization. EURASIP J. Bioinform. Syst. Biol. 2015 (2015)
Alan Veliz-Cuba, David Murrugarra, Reinhard C. Laubenbacher
Structure and dynamics of acyclic networks. Discret. Event Dyn. Syst. 24 (4) (2014)
Yuan Li, John O. Adeyeye, David Murrugarra, Boris Aguilar, Reinhard C. Laubenbacher
Boolean nested canalizing functions: A comprehensive analysis. Theor. Comput. Sci. 481 (2013)
David Murrugarra, Alan Veliz-Cuba, Boris Aguilar, Seda Arat, Reinhard C. Laubenbacher
Modeling stochasticity and variability in gene regulatory networks. EURASIP J. Bioinform. Syst. Biol. 2012 (2012)
Chris J. Kuhlman, Henning S. Mortveit, David Murrugarra, V. S. Anil Kumar
Bifurcations in Boolean Networks. Automata (2011)
Franziska Hinkelmann, David Murrugarra, Abdul Salam Jarrah, Reinhard C. Laubenbacher
A Mathematical Framework for Agent Based Models of Complex Biological Networks CoRR (2010)