David M. Umulis

Publication Activity (10 Years)

Years Active: 2011-2023
Publications (10 Years): 11

Top Topics

Computational Model

Biomedical Engineering

Confocal Images

Top Venues

PLoS Comput. Biol.

Publications

Linlin Li, Liming Wu, Alain Chen, Edward J. Delp, David M. Umulis
3D nuclei segmentation for multi-cellular quantification of zebrafish embryos using NISNet3D. 3DIA (2023)
Aishwarya Pawar, Linlin Li, Arun Gosain, David M. Umulis, Adrian Buganza Tepole
PDE-constrained shape registration to characterize biological growth and morphogenesis from imaging data. Eng. Comput. 38 (5) (2022)
Md. Shahriar Karim, Aasakiran Madamanchi, James A. Dutko, Mary C. Mullins, David M. Umulis
Heterodimer-heterotetramer formation mediates enhanced sensor activity in a biophysical model for BMP signaling. PLoS Comput. Biol. 17 (9) (2021)
Huma Shoaib, Monica E. Cardella, Aasakiran Madamanchi, David M. Umulis
Computation, Gender, and Engineering Identity Among Biomedical Engineering Undergraduates. FIE (2019)
Tzu-Ching Wu, Xu Wang, David M. Umulis
Ground Truth Annotator and 3D Dataset Generator for Validation of Nuclei Segmentation Programs. CISP-BMEI (2019)
Huma Shoaib, Monica Cardella, Aasakiran Madamanchi, David M. Umulis
An Investigation of Undergraduates' Computational Thinking in a Sophomore-Level Biomedical Engineering Course. FIE (2019)
Aasakiran Madamanchi, Shenika V. Poindexter, Monica E. Cardella, James A. Glazier, David M. Umulis
Qualitative Findings from Study of Interdisciplinary Education in Computational Modeling for Life Sciences Student Researchers from Emerging Research Institutions. FIE (2018)
Aasakiran Madamanchi, Monica E. Cardella, James A. Glazier, David M. Umulis
Factors Mediating Learning and Application of Computational Modeling by Life Scientists. FIE (2018)
Md. Shahriar Karim, Hans G. Othmer, David M. Umulis
Leveraging Compute Clusters for Large-Scale Parametric Screens of Reaction-Diffusion Systems. PDP (2018)
Joyatee M. Sarker, Serena M. Pearce, Robert P. Nelson Jr., Tamara Kinzer-Ursem, David M. Umulis, Ann E. Rundell
An Integrative multi-lineage model of variation in leukopoiesis and acute myelogenous leukemia. BMC Syst. Biol. 11 (1) (2017)
Yan Huang, David M. Umulis
A point matching algorithm for point set registration. CISP-BMEI (2016)
Michael Pargett, Ann E. Rundell, Gregery T. Buzzard, David M. Umulis
Germline Stem Cell Regulation. PLoS Comput. Biol. 10 (3) (2014)
David M. Umulis, Hans G. Othmer
Scale invariance of morphogen-mediated patterning by flux optimization. BMEI (2012)
Md. Shahriar Karim, David M. Umulis, Gregery T. Buzzard
Steady state probability approximation applied to stochastic model of biological network. GENSiPS (2011)