David M. Holloway

Publication Activity (10 Years)

Years Active: 2003-2018
Publications (10 Years): 3

Top Topics

Evolutionary Design

Gene Regulatory

Gene Expression

Top Venues

J. Bioinform. Comput. Biol.

J. Comput. Biol.

Publications

Theodore Alexandrov, Nina Golyandina, David M. Holloway, Alexander Shlemov, Alexander V. Spirov
Two-Exponential Models of Gene Expression Patterns for Noisy Experimental Data. J. Comput. Biol. 25 (11) (2018)
Alexander V. Spirov, Ekaterina M. Myasnikova, David M. Holloway
. J. Bioinform. Comput. Biol. 14 (2) (2016)
Leonid Zamdborg, David M. Holloway, Juan Julián Merelo Guervós, Vladimir F. Levchenko, Alexander V. Spirov
Forced evolution in silico by artificial transposons and their genetic operators: The ant navigation problem. Inf. Sci. 306 (2015)
Elizaveta A. Zagrijchuk, Marat A. Sabirov, David M. Holloway, Alexander V. Spirov
gene indicates redundancy in cis-regulatory organization and spatial gene expression. J. Bioinform. Comput. Biol. 12 (2) (2014)
Alexander V. Spirov, Elizaveta A. Zagriychuk, David M. Holloway
Evolutionary Design of Gene Networks: Forced Evolution by Genomic Parasites. Parallel Process. Lett. 24 (2) (2014)
Alexander V. Spirov, Carlos E. Vanario-Alonso, Ekaterina N. Spirova, David M. Holloway
Experimental Determination of Intrinsic Drosophila Embryo Coordinates by Evolutionary Computation. PRIB (2013)
Alexander V. Spirov, David M. Holloway
Modeling the Evolution of Gene Regulatory Networks for Spatial Patterning in Embryo Development. ICCS (2013)
David M. Holloway, Alexander B. Kazansky, Alexander V. Spirov
Complexification of Gene Networks by Co-evolution of Genomes and Genomic Parasites. IJCCI (2012)
Alexander V. Spirov, Nina Golyandina, David M. Holloway, Theodore Alexandrov, Ekaterina N. Spirova, Francisco J. P. Lopes
Measuring Gene Expression Noise in Early Drosophila Embryos: The Highly Dynamic Compartmentalized Micro-environment of the Blastoderm Is One of the Main Sources of Noise. EvoBIO (2012)
Alexander V. Spirov, David M. Holloway
Evolution in silico of genes with multiple regulatory modules on the example of the Drosophila segmentation gene hunchback. CIBCB (2012)
Nina Golyandina, David M. Holloway, Francisco J. P. Lopes, Alexander V. Spirov, Ekaterina N. Spirova, Konstantin Usevich
Measuring Gene Expression Noise in Early Drosophila Embryos: Nucleus-to-nucleus Variability. ICCS (2012)
Lionel G. Harrison, Richard J. Adams, David M. Holloway
Dynamic regulation of growing domains for elongating and branching morphogenesis in plants. Biosyst. 109 (3) (2012)
Alexander V. Spirov, David M. Holloway
Retroviral Genetic Algorithms - Implementation with Tags and Validation Against Benchmark Functions. IJCCI (ECTA-FCTA) (2011)
David M. Holloway, Francisco J. P. Lopes, Luciano da Fontoura Costa, Bruno Augusto Nassif Travençolo, Nina Golyandina, Konstantin Usevich, Alexander V. Spirov
Segmentation. PLoS Comput. Biol. 7 (2) (2011)
Alexander V. Spirov, David M. Holloway
Design of a dynamic model of genes with multiple autonomous regulatory modules by evolutionary computations. ICCS (1) (2010)
Francisco J. P. Lopes, Fernando M. C. Vieira, David M. Holloway, Paulo Mascarello Bisch, Alexander V. Spirov
Embryo. PLoS Comput. Biol. 4 (9) (2008)
Alexander V. Spirov, David M. Holloway
Gene Expression. EURASIP J. Adv. Signal Process. 2003 (8) (2003)
Alexander V. Spirov, David M. Holloway
Making the body plan: Precision in the genetic hierarchy of Drosophila embryo segmentation. Silico Biol. 3 (1-2) (2003)