Daniel Bean

Publication Activity (10 Years)

Years Active: 2019-2024
Publications (10 Years): 16

Top Topics

Ensemble Learning

Natural Language Processing

Clinical Trials

Top Venues

IEEE J. Biomed. Health Informatics

Artif. Intell. Medicine

Publications

Marco Postiglione, Daniel Bean, Zeljko Kraljevic, Richard J. B. Dobson, Vincenzo Moscato
Predicting Future Disorders via Temporal Knowledge Graphs and Medical Ontologies. IEEE J. Biomed. Health Informatics 28 (7) (2024)
Zeljko Kraljevic, Daniel Bean, Anthony Shek, Rebecca Bendayan, Joshua Au Yeung, Alexander Deng, Alfie Baston, Jack Ross, Esther Idowu, James T. Teo, Richard J. B. Dobson
Foresight - Deep Generative Modelling of Patient Timelines using Electronic Health Records. CoRR (2022)
Jack Wu, Zeljko Kraljevic, Thomas Searle, Daniel Bean, Richard J. B. Dobson
CogStack Cohort at TREC 2022 Clinical Trials Track. TREC (2022)
Zina M. Ibrahim, Daniel Bean, Thomas Searle, Linglong Qian, Honghan Wu, Anthony Shek, Zeljko Kraljevic, James Galloway, Sam Norton, James T. Teo, Richard J. B. Dobson
A Knowledge Distillation Ensemble Framework for Predicting Short- and Long-Term Hospitalization Outcomes From Electronic Health Records Data. IEEE J. Biomed. Health Informatics 26 (1) (2022)
Honghan Wu, Huayu Zhang, Andreas Karwath, Zina M. Ibrahim, Ting Shi, Xin Zhang, Kun Wang, Jiaxing Sun, Kevin Dhaliwal, Daniel Bean, Victor Roth Cardoso, Kezhi Li, James T. Teo, Amitava Banerjee, Fang Gao-Smith, Tony Whitehouse, Tonny Veenith, Georgios V. Gkoutos, Xiaodong Wu, Richard J. B. Dobson, Bruce Guthrie
Ensemble learning for poor prognosis predictions: A case study on SARS-CoV-2. J. Am. Medical Informatics Assoc. 28 (4) (2021)
Zeljko Kraljevic, Anthony Shek, Daniel Bean, Rebecca Bendayan, James T. Teo, Richard J. B. Dobson
MedGPT: Medical Concept Prediction from Clinical Narratives. CoRR (2021)
Jiajing Hu, Rosalba Lepore, Richard J. B. Dobson, Ammar Al-Chalabi, Daniel Bean, Alfredo Iacoangeli
DGLinker: flexible knowledge-graph prediction of disease-gene associations. Nucleic Acids Res. 49 (Webserver-Issue) (2021)
Zeljko Kraljevic, Thomas Searle, Anthony Shek, Lukasz Roguski, Kawsar Noor, Daniel Bean, Aurelie Mascio, Leilei Zhu, Amos A. Folarin, Angus Roberts, Rebecca Bendayan, Mark P. Richardson, Robert Stewart, Anoop D. Shah, Wai Keong Wong, Zina M. Ibrahim, James T. Teo, Richard J. B. Dobson
Multi-domain clinical natural language processing with MedCAT: The Medical Concept Annotation Toolkit. Artif. Intell. Medicine 117 (2021)
Aurelie Mascio, Zeljko Kraljevic, Daniel Bean, Richard J. B. Dobson, Robert Stewart, Rebecca Bendayan, Angus Roberts
Comparative Analysis of Text Classification Approaches in Electronic Health Records. BioNLP (2020)
Aurelie Mascio, Zeljko Kraljevic, Daniel Bean, Richard J. B. Dobson, Robert Stewart, Rebecca Bendayan, Angus Roberts
Comparative Analysis of Text Classification Approaches in Electronic Health Records. CoRR (2020)
Zina M. Ibrahim, Daniel Bean, Thomas Searle, Honghan Wu, Anthony Shek, Zeljko Kraljevic, James Galloway, Sam Norton, James T. Teo, Richard J. B. Dobson
A Knowledge Distillation Ensemble Framework for Predicting Short and Long-term Hospitalisation Outcomes from Electronic Health Records Data. CoRR (2020)
Zeljko Kraljevic, Thomas Searle, Anthony Shek, Lukasz Roguski, Kawsar Noor, Daniel Bean, Aurelie Mascio, Leilei Zhu, Amos A. Folarin, Angus Roberts, Rebecca Bendayan, Mark P. Richardson, Robert Stewart, Anoop D. Shah, Wai Keong Wong, Zina M. Ibrahim, James T. Teo, Richard J. B. Dobson
Multi-domain Clinical Natural Language Processing with MedCAT: the Medical Concept Annotation Toolkit. CoRR (2020)
Rebecca Bendayan, Honghan Wu, Zeljko Kraljevic, Robert Stewart, Tom Searle, Jaya Chaturvedi, Jayati Das-Munshi, Zina M. Ibrahim, Aurelie Mascio, Angus Roberts, Daniel Bean, Richard J. B. Dobson
Identifying physical health comorbidities in a cohort of individuals with severe mental illness: An application of SemEHR. CoRR (2020)
Thomas Searle, Zeljko Kraljevic, Rebecca Bendayan, Daniel Bean, Richard J. B. Dobson
MedCATTrainer: A Biomedical Free Text Annotation Interface with Active Learning and Research Use Case Specific Customisation. CoRR (2019)
Thomas Searle, Zeljko Kraljevic, Rebecca Bendayan, Daniel Bean, Richard J. B. Dobson
MedCATTrainer: A Biomedical Free Text Annotation Interface with Active Learning and Research Use Case Specific Customisation. EMNLP/IJCNLP (3) (2019)
Zeljko Kraljevic, Daniel Bean, Aurelie Mascio, Lukasz Roguski, Amos Folarin, Angus Roberts, Rebecca Bendayan, Richard J. B. Dobson
MedCAT - Medical Concept Annotation Tool. CoRR (2019)