Christopher Pockrandt

Publication Activity (10 Years)

Years Active: 2016-2022
Publications (10 Years): 7

Top Topics

Top Venues

J. Open Source Softw.

Free University of Berlin, Dahlem, Germany (PHD)

Education History

Free University of Berlin, Dahlem, Germany

PHD

Publications

Christopher Pockrandt, Aleksey V. Zimin, Steven L. Salzberg
Metagenomic classification with KrakenUniq on low-memory computers. J. Open Source Softw. 7 (80) (2022)
Christopher Pockrandt, Martin Steinegger, Steven L. Salzberg
PhyloCSF++: a fast and user-friendly implementation of PhyloCSF with annotation tools. Bioinform. 38 (5) (2022)
Ales Varabyou, Geo Pertea, Christopher Pockrandt, Mihaela Pertea
TieBrush: an efficient method for aggregating and summarizing mapped reads across large datasets. Bioinform. 37 (20) (2021)
Christopher Pockrandt, Mai Alzamel, Costas S. Iliopoulos, Knut Reinert
GenMap: ultra-fast computation of genome mappability. Bioinform. 36 (12) (2020)
Christopher Pockrandt, Marcel Ehrhardt, Knut Reinert
EPR-Dictionaries: A Practical and Fast Data Structure for Constant Time Searches in Unidirectional and Bidirectional FM Indices. RECOMB (2017)
Kiavash Kianfar, Christopher Pockrandt, Bahman Torkamandi, Haochen Luo, Knut Reinert
FAMOUS: Fast Approximate string Matching using OptimUm search Schemes. CoRR (2017)
Christopher Pockrandt, Marcel Ehrhardt, Knut Reinert
Constant-time and space-efficient unidirectional and bidirectional FM-indices using EPR-dictionaries. CoRR (2016)