Christopher L. Schardl

Publication Activity (10 Years)

Years Active: 2009-2024
Publications (10 Years): 2

Top Topics

Distance Matrix

Phylogenetic Trees

Quality Assurance

Data Acquisition

Top Venues

IEEE ACM Trans. Comput. Biol. Bioinform.

Publications

Andrew C. Tapia, Jerzy W. Jaromczyk, Neil Moore, Christopher L. Schardl
RNA-clique: a method for computing genetic distances from RNA-seq data. BMC Bioinform. 25 (1) (2024)
Qiwen Kang, Neil Moore, Christopher L. Schardl, Ruriko Yoshida
CURatio: Genome-Wide Phylogenomic Analysis Method Using Ratios of Total Branch Lengths. IEEE ACM Trans. Comput. Biol. Bioinform. 17 (3) (2020)
Roger G. Chui, Jerzy W. Jaromczyk, Neil Moore, Christopher L. Schardl
Validation and quality assurance for genome browser database exports. BMC Bioinform. 16 (S15) (2015)
Grady Weyenberg, Peter Huggins, Christopher L. Schardl, Daniel K. Howe, Ruriko Yoshida
kdetrees: non-parametric estimation of phylogenetic tree distributions. Bioinform. 30 (16) (2014)
Neil Moore, Jerzy W. Jaromczyk, Christopher L. Schardl, Joedocei Hill, Devin Wright
Automating deployment of several GBrowse instances. BMC Bioinform. 15 (S-10) (2014)
Mark L. Farman, Patrick Calie, Jerzy W. Jaromczyk, Jolanta Jaromczyk, Neil Moore, Daniel R. Harris, Christopher L. Schardl
An adaptive landscape for training in the essentials of next gen sequencing data acquisition and bioinformatic analysis. BMC Bioinform. 15 (S-10) (2014)
Tyler Parke, Mark L. Farman, Elizabeth Farnsworth, Derek Fox, Jerzy W. Jaromczyk, Jolanta Jaromczyk, Neil Moore, Christopher L. Schardl, Ruriko Yoshida, Patrick Calie
Using HPC for teaching and learning bioinformatics software: Benefits and challenges. BMC Bioinform. 14 (S-17) (2013)
Roger G. Chui, Jerzy W. Jaromczyk, Neil Moore, Christopher L. Schardl
FPD2GB2: Automating a transition from a customized genome browser to GBrowse2. BMC Bioinform. 14 (S-17) (2013)
Neil Moore, Jerzy W. Jaromczyk, Christopher L. Schardl
Finding long protein products of alternatively spliced genes. BMC Bioinform. 13 (S-12) (2012)
Jerzy W. Jaromczyk, Neil Moore, Christopher L. Schardl
A linear-time algorithm for finding a maximum-length ORF in a splice graph. Int. J. Comput. Biol. Drug Des. 5 (3/4) (2012)
Elissaveta G. Arnaoudova, Jerzy W. Jaromczyk, Neil Moore, Christopher L. Schardl, Ruriko Yoshida
- a toolkit for computing experiments with distance-based methods for genome coevolution. BMC Bioinform. 11 (S-4) (2010)
Daniel R. Harris, Jerzy W. Jaromczyk, Christopher L. Schardl
Experimenting with database segmentation size vs time performance for mpiBLAST on an IBM HS21 blade cluster. BMC Bioinform. 11 (S-4) (2010)
Elissaveta G. Arnaoudova, Philip J. Bowens, Roger G. Chui, Randy D. Dinkins, Uljana Hesse, Jerzy W. Jaromczyk, Mitchell Martin, Paul Maynard, Neil Moore, Christopher L. Schardl
Visualizing and sharing results in bioinformatics projects: GBrowse and GenBank exports. BMC Bioinform. 10 (S-7) (2009)