Chikara Furusawa

Publication Activity (10 Years)

Years Active: 1998-2023
Publications (10 Years): 3

Top Topics

Fitness Landscape

Gene Expression

Metabolic Engineering

Top Venues

PLoS Comput. Biol.

Publications

Yuji Omachi, Nen Saito, Chikara Furusawa
Rare-event sampling analysis uncovers the fitness landscape of the genetic code. PLoS Comput. Biol. 19 (4) (2023)
Tetsuhiro S. Hatakeyama, Chikara Furusawa
Metabolic dynamics restricted by conserved carriers: Jamming and feedback. PLoS Comput. Biol. 13 (11) (2017)
Hirotaka Matsumoto, Hisanori Kiryu, Chikara Furusawa, Minoru S. H. Ko, Shigeru B. H. Ko, Norio Gouda, Tetsutaro Hayashi, Itoshi Nikaido
SCODE: an efficient regulatory network inference algorithm from single-cell RNA-Seq during differentiation. Bioinform. 33 (15) (2017)
Tadashi Miyamoto, Chikara Furusawa, Kunihiko Kaneko
Pluripotency, Differentiation, and Reprogramming: A Gene Expression Dynamics Model with Epigenetic Feedback Regulation. PLoS Comput. Biol. 11 (8) (2015)
Satoshi Ohno, Hiroshi Shimizu, Chikara Furusawa
FastPros: screening of reaction knockout strategies for metabolic engineering. Bioinform. 30 (7) (2014)
Sunisa Chatsurachai, Chikara Furusawa, Hiroshi Shimizu
An in silico platform for the design of heterologous pathways in nonnative metabolite production. BMC Bioinform. 13 (2012)
Chikara Furusawa, Kota Ijichi, Hiroshi Shimizu
Fluctuation-Driven Adaptation and Symbiosis in Cellular Dynamics. BIONETICS (2010)
Kumiko Kihara, Kotaro Mori, Shingo Suzuki, Naoaki Ono, Chikara Furusawa, Tetsuya Yomo
Global/temporal gene expression analysis of Escherichia coli in the early stages of symbiotic relationship development with the cellular slime mold Dictyostelium discoideum. Biosyst. 96 (2) (2009)
Jianhong Ou, Chikara Furusawa, Tetsuya Yomo, Hiroshi Shimizu
Analysis of stochasticity in promoter activation by using a dual-fluorescence reporter system. Biosyst. 97 (3) (2009)
Chikara Furusawa, Naoaki Ono, Shingo Suzuki, Tomoharu Agata, Hiroshi Shimizu, Tetsuya Yomo
Model-based analysis of non-specific binding for background correction of high-density oligonucleotide microarrays. Bioinform. 25 (1) (2009)
Tomoharu Hogiri, Chikara Furusawa, Yohei Shinfuku, Naoaki Ono, Hiroshi Shimizu
Analysis of metabolic network based on conservation of molecular structure. Biosyst. 95 (3) (2009)
Naoaki Ono, Shingo Suzuki, Chikara Furusawa, Hiroshi Shimizu, Tetsuya Yomo
Quantitative expression analysis using oligonucleotide microarrays based on a physico-chemical model. BIONETICS (2008)
Chikara Furusawa, Kunihiko Kaneko, Hiroshi Shimizu
A noise-driven mechanism for adaptive growth rate regulation. BIONETICS (2008)
Hiroshi Shimizu, Yohei Shinfuku, Masahiro Sono, Chikara Furusawa, Takashi Hirasawa
Metabolic flux balance analysis of an industrially useful microorganism Corynebacerium glutamicum by a genome-scale reconstructed model. BIONETICS (2008)
Naoaki Ono, Shingo Suzuki, Chikara Furusawa, Tomoharu Agata, Akiko Kashiwagi, Hiroshi Shimizu, Tetsuya Yomo
An improved physico-chemical model of hybridization on high-density oligonucleotide microarrays. Bioinform. 24 (10) (2008)
Kunihiko Kaneko, Chikara Furusawa
Consistency principle in biological dynamical systems. Theory Biosci. 127 (2) (2008)
Chikara Furusawa, Kunihiko Kaneko
A Generic Mechanism for Adaptive Growth Rate Regulation. PLoS Comput. Biol. 4 (1) (2008)
Tadashi Yamada, Chikara Furusawa, Keisuke Nagahisa, Akiko Kashiwagi, Tetsuya Yomo, Hiroshi Shimizu
Analysis of fluctuation in protein abundance without promoter regulation based on Escherichia coli continuous culture. Biosyst. 90 (3) (2007)
Chikara Furusawa, Kunihiko Kaneko
Emergence of Two Power-Laws in Evolution of Biochemical Network; Embedding Abundance Distribution into Topology. BioADIT (2006)
Tadashi Yamada, Makoto Sadamitsu, Keisuke Nagahisa, Akiko Kashiwagi, Chikara Furusawa, Tetsuya Yomo, Hiroshi Shimizu
Analysis of Fluctuation in Gene Expression Based on Continuous Culture System. BioADIT (2006)
Chikara Furusawa, Kunihiko Kaneko
Complex Organization in Multicellularity as a Necessity in EvolutionComplex Organization in Multicellularity as a Necessity in Evolution. Artif. Life 6 (4) (2000)
Chikara Furusawa, Kunihiko Kaneko
Emergence of Multicellular Organisms with Dynamic Differentiation and Spatial Pattern. Artif. Life 4 (1) (1998)