Charles J. Vaske

Publication Activity (10 Years)

Years Active: 2009-2013
Publications (10 Years): 0

Top Topics

Biological Data

Computational Approaches

Space Filling Curves

Protein Complexes

Top Venues

IEEE Signal Process. Mag.

Nucleic Acids Res.

Publications

Andrew J. Sedgewick, Stephen C. Benz, Shahrooz Rabizadeh, Patrick Soon-Shiong, Charles J. Vaske
Learning subgroup-specific regulatory interactions and regulator independence with PARADIGM. Bioinform. 29 (13) (2013)
Christopher K. Wong, Charles J. Vaske, Sam Ng, J. Zachary Sanborn, Stephen C. Benz, David Haussler, Joshua M. Stuart
The UCSC Interaction Browser: multidimensional data views in pathway context. Nucleic Acids Res. 41 (Webserver-Issue) (2013)
Vinay Varadan, Prateek Mittal, Charles J. Vaske, Stephen C. Benz
The Integration of Biological Pathway Knowledge in Cancer Genomics: A review of existing computational approaches. IEEE Signal Process. Mag. 29 (1) (2012)
J. Zachary Sanborn, Stephen C. Benz, Brian Craft, Christopher Szeto, Kord M. Kober, Laurence R. Meyer, Charles J. Vaske, Mary Goldman, Kayla E. Smith, Robert M. Kuhn, Donna Karolchik, W. James Kent, Joshua M. Stuart, David Haussler, Jingchun Zhu
The UCSC cancer genomics browser: update 2011. Nucleic Acids Res. 39 (Database-Issue) (2011)
Charles J. Vaske, Stephen C. Benz, J. Zachary Sanborn, Dent Earl, Christopher Szeto, Jingchun Zhu, David Haussler, Joshua M. Stuart
Inference of patient-specific pathway activities from multi-dimensional cancer genomics data using PARADIGM. Bioinform. 26 (12) (2010)
Charles J. Vaske, Carrie House, Truong Luu, Bryan Frank, Chen-Hsiang Yeang, Norman H. Lee, Joshua M. Stuart
A Factor Graph Nested Effects Model To Identify Networks from Genetic Perturbations. PLoS Comput. Biol. 5 (1) (2009)
Pinal N. Kanabar, Charles J. Vaske, Chen-Hsiang Yeang, Fitnat H. Yildiz, Joshua M. Stuart
Inferring Disease-Related Pathways Using A Probabilistic Epistasis Model. Pacific Symposium on Biocomputing (2009)