Brian Yuan Chen

Publication Activity (10 Years)

Years Active: 2011-2016
Publications (10 Years): 5

Top Topics

Statistical Model

Transcription Factor Binding Sites

Protein Structure

Top Venues

IEEE ACM Trans. Comput. Biol. Bioinform.

J. Comput. Biol.

Publications

Ziyi Guo, Brian Yuan Chen
A map of binding cavity conformations reveals differences in binding specificity. BIBM (2016)
Ziyi Guo, Brian Yuan Chen
Conformational Sampling Reveals Amino Acids with a Steric Influence on Specificity. J. Comput. Biol. 22 (9) (2015)
Ziyi Guo, Brian Yuan Chen
Predicting protein-ligand binding specificity based on ensemble clustering. BIBM (2015)
Ziyi Guo, Katya Scheinberg, Juliana Hong, Brian Yuan Chen
Superposition of protein structures using electrostatic isopotentials. BIBM (2015)
Rachel Y. Okun, Brian Yuan Chen
A statistical model of electrostatic isopotential variation in serine protease binding cavities. BIBM (2015)
Ziyi Guo, Brian Yuan Chen
Variational Bayesian clustering on protein cavity conformations for detecting influential amino acids. BCB (2014)
Zachary A. Daniels, Steven R. Stinson, Shenchi Tian, Evan Mulbry, Brian Yuan Chen
A gesture-based interface for the exploration and classification of protein binding cavities. MARS@MobiSys (2014)
Ziyi Guo, Trevor Kuhlengel, Steven R. Stinson, Seth Blumenthal, Brian Yuan Chen, Soutir Bandyopadhyay
A flexible volumetric comparison of protein cavities can reveal patterns in ligand binding specificity. BCB (2014)
Seth Blumenthal, Yisheng Tang, Wenjie Yang, Brian Yuan Chen
Isolating Influential Regions of Electrostatic Focusing in Protein and DNA Structure. IEEE ACM Trans. Comput. Biol. Bioinform. 10 (5) (2013)
Ruobing Chen, Katya Scheinberg, Brian Yuan Chen
Aligning ligand binding cavities by optimizing superposed volume. BIBM (2012)
Brian Yuan Chen, Soutir Bandyopadhyay
A Regionalizable Statistical Model of Intersecting Regions in protein-ligand binding Cavities. J. Bioinform. Comput. Biol. 10 (3) (2012)
Brian Yuan Chen, Soutir Bandyopadhyay
VASP-S: A Volumetric Analysis and Statistical Model for Predicting Steric Influences on Protein-Ligand Binding Specificity. BIBM (2011)
Brian Yuan Chen, Soutir Bandyopadhyay
A statistical model of overlapping volume in ligand binding cavities. BIBM Workshops (2011)