Brian G. Pierce

Publication Activity (10 Years)

Years Active: 2005-2023
Publications (10 Years): 6

Top Topics

Experimentally Determined

Protein Structure

Top Venues

Nucleic Acids Res.

PLoS Comput. Biol.

Publications

Rui Yin, Helder Veras Ribeiro filho, Valerie Lin, Ragul Gowthaman, Melyssa Cheung, Brian G. Pierce
TCRmodel2: high-resolution modeling of T cell receptor recognition using deep learning. Nucleic Acids Res. 51 (W1) (2023)
Tyler Borrman, Brian G. Pierce, Thom Vreven, Brian M. Baker, Zhiping Weng
High-throughput modeling and scoring of TCR-pMHC complexes to predict cross-reactive peptides. Bioinform. 36 (22-23) (2021)
Rui Yin, Johnathan D. Guest, Ghazaleh Taherzadeh, Ragul Gowthaman, Ipsa Mittra, Jane Quackenbush, Brian G. Pierce
Structural and energetic profiling of SARS-CoV-2 receptor binding domain antibody recognition and the impact of circulating variants. PLoS Comput. Biol. 17 (9) (2021)
Ragul Gowthaman, Johnathan D. Guest, Rui Yin, Jared Adolf-Bryfogle, William R. Schief, Brian G. Pierce
CoV3D: a database of high resolution coronavirus protein structures. Nucleic Acids Res. 49 (Database-Issue) (2021)
Ragul Gowthaman, Brian G. Pierce
TCR3d: The T cell receptor structural repertoire database. Bioinform. 35 (24) (2019)
Ragul Gowthaman, Brian G. Pierce
TCRmodel: high resolution modeling of T cell receptors from sequence. Nucleic Acids Res. 46 (Webserver-Issue) (2018)
Thom Vreven, Howook Hwang, Brian G. Pierce, Zhiping Weng
Evaluating template-based and template-free protein-protein complex structure prediction. Briefings Bioinform. 15 (2) (2014)
Brian G. Pierce, Kevin Wiehe, Howook Hwang, Bong-Hyun Kim, Thom Vreven, Zhiping Weng
ZDOCK server: interactive docking prediction of protein-protein complexes and symmetric multimers. Bioinform. 30 (12) (2014)
Brian G. Pierce, Thom Vreven, Zhiping Weng
Modeling T cell receptor recognition of CD1-lipid and MR1-metabolite complexes. BMC Bioinform. 15 (2014)
Brian G. Pierce, Lance M. Hellman, Moushumi Hossain, Nishant K. Singh, Craig W. Vander Kooi, Zhiping Weng, Brian M. Baker
Computational Design of the Affinity and Specificity of a Therapeutic T Cell Receptor. PLoS Comput. Biol. 10 (2) (2014)
Jie Wang, Jiali Zhuang, Sowmya Iyer, Xin-Ying Lin, Melissa C. Greven, Bong-Hyun Kim, Jill Moore, Brian G. Pierce, Xianjun Dong, Daniel Virgil, Ewan Birney, Jui-Hung Hung, Zhiping Weng
Factorbook.org: a Wiki-based database for transcription factor-binding data generated by the ENCODE consortium. Nucleic Acids Res. 41 (Database-Issue) (2013)
Brian G. Pierce, Weiwei Tong, Zhiping Weng
symmetric multimer docking. Bioinform. 21 (8) (2005)