Benjamin Berkels

ORCID

Publication Activity (10 Years)

Years Active: 2006-2023
Publications (10 Years): 25

Top Venues

CoRR

Bildverarbeitung für die Medizin

SSVM

VMV

University of Bonn (PHD)

Education History

University of Bonn

PHD

Publications

Amel Shamseldeen Ali Alhasan, Siyuan Zhang, Benjamin Berkels
Direct Motif Extraction from High Resolution Crystalline STEM Images. CoRR (2023)
Jan-Christopher Cohrs, Chandrajit Bajaj, Benjamin Berkels
A Distribution-Dependent Mumford-Shah Model for Unsupervised Hyperspectral Image Segmentation. IEEE Trans. Geosci. Remote. Sens. 60 (2022)
Jan-Christopher Cohrs, Chandrajit Bajaj, Benjamin Berkels
A distribution-dependent Mumford-Shah model for unsupervised hyperspectral image segmentation. CoRR (2022)
Karina Ruzaeva, Jan-Christopher Cohrs, Keitaro Kasahara, Dietrich Kohlheyer, Katharina Nöh, Benjamin Berkels
Cell tracking for live-cell microscopy using an activity-prioritized assignment strategy. IPAS (2022)
Karina Ruzaeva, Kira Küsters, Wolfgang Wiechert, Benjamin Berkels, Marco Oldiges, Katharina Nöh
Automated Characterization of Catalytically Active Inclusion Body Production in Biotechnological Screening Systems. EMBC (2022)
Karina Ruzaeva, Jan-Christopher Cohrs, Keitaro Kasahara, Dietrich Kohlheyer, Katharina Nöh, Benjamin Berkels
Cell tracking for live-cell microscopy using an activity-prioritized assignment strategy. CoRR (2022)
Karina Ruzaeva, Katharina Nöh, Benjamin Berkels
A hybrid multi-object segmentation framework with model-based B-splines for microbial single cell analysis. CoRR (2022)
Mary L. Comer, Jeff P. Simmons, Steve Niezgoda, Charles A. Bouman, Benjamin Berkels
Signal Processing for Advanced Materials [From the Guest Editors]. IEEE Signal Process. Mag. 39 (1) (2022)
Karina Ruzaeva, Katharina Nöh, Benjamin Berkels
A Hybrid Multi-Object Segmentation Framework with Model-Based B-Splines for Microbial Single Cell Analysis. ISBI (2022)
Karina Ruzaeva, Kira Küsters, Wolfgang Wiechert, Benjamin Berkels, Marco Oldiges, Katharina Nöh
Automated Characterization of Catalytically Active Inclusion Body Production in Biotechnological Screening Systems. CoRR (2022)
Marcin Copik, Tobias Grosser, Torsten Hoefler, Paolo Bientinesi, Benjamin Berkels
Work-Stealing Prefix Scan: Addressing Load Imbalance in Large-Scale Image Registration. IEEE Trans. Parallel Distributed Syst. 33 (3) (2022)
Johanna C. Clauser, Judith Maas, Jutta Arens, Thomas Schmitz-Rode, Ulrich Steinseifer, Benjamin Berkels
Automation of hemocompatibility analysis using image segmentation and supervised classification. Eng. Appl. Artif. Intell. 97 (2021)
Karina Ruzaeva, Katharina Nöh, Benjamin Berkels
Polar Space Based Shape Averaging for Star-shaped Biological Objects. VCBM (2021)
Thomas Pinetz, Erich Kobler, Christian Doberstein, Benjamin Berkels, Alexander Effland
Total Deep Variation for Noisy Exit Wave Reconstruction in Transmission Electron Microscopy. SSVM (2021)
Johanna C. Clauser, Judith Maas, Jutta Arens, Thomas Schmitz-Rode, Ulrich Steinseifer, Benjamin Berkels
Automation of Hemocompatibility Analysis Using Image Segmentation and a Random Forest. CoRR (2020)
Marcin Copik, Tobias Grosser, Torsten Hoefler, Paolo Bientinesi, Benjamin Berkels
Work-stealing prefix scan: Addressing load imbalance in large-scale image registration. CoRR (2020)
Niklas Mevenkamp, Benjamin Berkels
Variational Multi-Phase Segmentation using High-Dimensional Local Features. CoRR (2019)
András P. Keszei, Benjamin Berkels, Thomas M. Deserno
Survey of Non-Rigid Registration Tools in Medicine. J. Digit. Imaging 30 (1) (2017)
Rosalia Tatano, Benjamin Berkels, Thomas M. Deserno
Mesh-to-raster based non-rigid registration of multi-modal images. CoRR (2017)
Benjamin Berkels, Alexander Effland, Martin Rumpf
A posteriori error control for the binary Mumford-Shah model. Math. Comput. 86 (306) (2017)
Benjamin Berkels, Michael Buchner, Alexander Effland, Martin Rumpf, Steffen Schmitz-Valckenberg
GPU-Based Image Geodesics for Optical Coherence Tomography. Bildverarbeitung für die Medizin (2017)
Niklas Mevenkamp, Benjamin Berkels
Variational multi-phase segmentation using high-dimensional local features. WACV (2016)
Benjamin Berkels, Thomas Martin Deserno, Eva E. Ehrlich, Ulrike B. Fritz, Ekaterina Sirazitdinova, Rosalia Tatano
Curve-to-Image Based Non-Rigid Registration of Digital Photos and Quantitative Light-Induced Fluorescence Images in Dentistry. Bildverarbeitung für die Medizin (2016)
Benjamin Berkels, Thomas Martin Deserno, Eva E. Ehrlich, Ulrike B. Fritz, Ekaterina Sirazitdinova, Rosalia Tatano
Non-rigid contour-to-pixel registration of photographic and quantitative light-induced fluorescence imaging of decalcified teeth. Medical Imaging: Image Processing (2016)
Benjamin Berkels, Benedikt Wirth
Joint denoising and distortion correction of atomic scale scanning transmission electron microscopy images. CoRR (2016)
Alexander Derksen, Stefan Heldmann, Thomas Polzin, Benjamin Berkels
Image Registration with Sliding Motion Constraints for 4D CT Motion Correction. Bildverarbeitung für die Medizin (2015)
Stefan Heldmann, Thomas Polzin, Alexander Derksen, Benjamin Berkels
An image registration framework for sliding motion with piecewise smooth deformations. SSVM (2015)
Niklas Mevenkamp, Benjamin Berkels
Unsupervised and Accurate Extraction of Primitive Unit Cells from Crystal Images. GCPR (2015)
Kanglin Chen, Alexander Derksen, Stefan Heldmann, Marc Hallmann, Benjamin Berkels
Deformable Image Registration with Automatic Non-Correspondence Detection. SSVM (2015)
Benjamin Berkels, Alexander Effland, Martin Rumpf
Time Discrete Geodesic Paths in the Space of Images. SIAM J. Imaging Sci. 8 (3) (2015)
Constantin Heck, Lars Ruthotto, Jan Modersitzki, Benjamin Berkels
Model-Based Parameterestimation in DCE-MRI Without an Arterial Input Function. Bildverarbeitung für die Medizin (2014)
Benjamin Berkels, Ivan Cabrilo, Sven Haller, Martin Rumpf, Karl Schaller
Co-registration of intra-operative brain surface photographs and pre-operative MR images. Int. J. Comput. Assist. Radiol. Surg. 9 (3) (2014)
Anna K. Trull, Benjamin Berkels, Jan Modersitzki
Glomerular Filtration Rate Estimation from Dynamic Contrast-Enhanced MRI. Bildverarbeitung für die Medizin (2014)
Niklas Mevenkamp, Andrew B. Yankovich, Paul M. Voyles, Benjamin Berkels
Non-local Means for Scanning Transmission Electron Microscopy Images and Poisson Noise based on Adaptive Periodic Similarity Search and Patch Regularization. VMV (2014)
Benjamin Berkels, Peter Binev, Douglas A. Blom, Wolfgang Dahmen, Robert C. Sharpley, Thomas Vogt
Optimized imaging using non-rigid registration. CoRR (2014)
José A. Iglesias, Benjamin Berkels, Martin Rumpf, Otmar Scherzer
A Thin Shell Approach to the Registration of Implicit Surfaces. VMV (2013)
Benjamin Berkels, P. Thomas Fletcher, Behrend Heeren, Martin Rumpf, Benedikt Wirth
Discrete Geodesic Regression in Shape Space. EMMCVPR (2013)
Benjamin Berkels, Ivan Cabrilo, Sven Haller, Martin Rumpf, Carlo Schaller
Co-Registration of Intra-Operative Photographs and Pre-Operative MR Images. Bildverarbeitung für die Medizin (2013)
Benjamin Berkels, Ivan Cabrilo, Sven Haller, Martin Rumpf, Carlo Schaller
Cortical Surface Co-Registration based on MRI Images and Photos CoRR (2013)
Sebastian Bauer, Benjamin Berkels, Svenja Ettl, Oliver Arold, Joachim Hornegger, Martin Rumpf
Marker-Less Reconstruction of Dense 4-D Surface Motion Fields Using Active Laser Triangulation for Respiratory Motion Management. MICCAI (1) (2012)
Sebastian Bauer, Benjamin Berkels, Joachim Hornegger, Martin Rumpf
Joint ToF Image Denoising and Registration with a CT Surface in Radiation Therapy. SSVM (2011)
Benjamin Berkels, Marc Kotowski, Martin Rumpf, Carlo Schaller
Sulci Detection in Photos of the Human Cortex Based on Learned Discriminative Dictionaries. SSVM (2011)
Benjamin Berkels, Gina Linkmann, Martin Rumpf
An SL(2) Invariant Shape Median. J. Math. Imaging Vis. 37 (2) (2010)
Claudia Nieuwenhuis, Benjamin Berkels, Martin Rumpf, Daniel Cremers
Interactive Motion Segmentation. DAGM-Symposium (2010)
Markus Boerdgen, Benjamin Berkels, Martin Rumpf, Daniel Cremers
Convex Relaxation for Grain Segmentation at Atomic Scale. VMV (2010)
Benjamin Berkels, Claudia Kondermann, Christoph S. Garbe, Martin Rumpf
Reconstructing Optical Flow Fields by Motion Inpainting. EMMCVPR (2009)
Benjamin Berkels
An Unconstrained Multiphase Thresholding Approach for Image Segmentation. SSVM (2009)
Benjamin Berkels, Andreas Rätz, Martin Rumpf, Axel Voigt
Extracting Grain Boundaries and Macroscopic Deformations from Images on Atomic Scale. J. Sci. Comput. 35 (1) (2008)
Benjamin Berkels, Gina Linkmann, Martin Rumpf
Shape Median Based on Symmetric Area Differences. VMV (2008)
Leah Bar, Benjamin Berkels, Martin Rumpf, Guillermo Sapiro
A Variational Framework for Simultaneous Motion Estimation and Restoration of Motion-Blurred Video. ICCV (2007)
Jingfeng Han, Benjamin Berkels, Marc Droske, Joachim Hornegger, Martin Rumpf, Carlo Schaller, Jasmin Scorzin, Horst Urbach
Mumford-Shah Model for One-to-One Edge Matching. IEEE Trans. Image Process. 16 (11) (2007)
Benjamin Berkels, Andreas Rätz, Martin Rumpf, Axel Voigt
Identification of Grain Boundary Contours at Atomic Scale. SSVM (2007)
Jingfeng Han, Benjamin Berkels, Martin Rumpf, Joachim Hornegger, Marc Droske, Michael Fried, Jasmin Scorzin, Carlo Schaller
A Variational Framework for Joint Image Registration, Denoising and Edge Detection. Bildverarbeitung für die Medizin (2006)

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Publication Activity (10 Years)

Top Topics

Top Venues

Benjamin Berkels