Anatoly M. Ruvinsky

Publication Activity (10 Years)

Years Active: 2005-2017
Publications (10 Years): 1

Top Topics

Protein Structure

Statistical Significance

Top Venues

J. Chem. Inf. Model.

Publications

S. Roy Kimura, Hai Peng Hu, Anatoly M. Ruvinsky, Woody Sherman, Angelo D. Favia
Deciphering Cryptic Binding Sites on Proteins by Mixed-Solvent Molecular Dynamics. J. Chem. Inf. Model. 57 (6) (2017)
Tatsiana Kirys, Anatoly M. Ruvinsky, Deepak Singla, Alexander V. Tuzikov, Petras J. Kundrotas, Ilya A. Vakser
Simulated unbound structures for benchmarking of protein docking in the Dockground resource. BMC Bioinform. 16 (2015)
Anatoly M. Ruvinsky, Tatsiana Kirys, Alexander V. Tuzikov, Ilya A. Vakser
Structure fluctuations and conformational Changes in protein binding. J. Bioinform. Comput. Biol. 10 (2) (2012)
Tatsiana Kirys, Anatoly M. Ruvinsky, Alexander V. Tuzikov, Ilya A. Vakser
Correlation analysis of the side-chains conformational distribution in bound and unbound proteins. BMC Bioinform. 13 (2012)
Anatoly M. Ruvinsky, Ilya A. Vakser
potentials. Bioinform. 25 (9) (2009)
Anatoly M. Ruvinsky
Role of binding entropy in the refinement of protein-ligand docking predictions: Analysis based on the use of 11 scoring functions. J. Comput. Chem. 28 (8) (2007)
Anatoly M. Ruvinsky
Calculations of protein-ligand binding entropy of relative and overall molecular motions. J. Comput. Aided Mol. Des. 21 (7) (2007)
Anatoly M. Ruvinsky, A. V. Kozintsev
New and fast statistical-thermodynamic method for computation of protein-ligand binding entropy substantially improves docking accuracy. J. Comput. Chem. 26 (11) (2005)