Ana-Nicoleta Bondar

Publication Activity (10 Years)

Years Active: 2012-2023
Publications (10 Years): 9

Top Topics

Regularization Framework

Energy Functional

Active Contours

Top Venues

J. Chem. Inf. Model.

J. Comput. Chem.

Publications

Samo Lesnik, Urban Bren, Tatiana Domratcheva, Ana-Nicoleta Bondar
Fentanyl and the Fluorinated Fentanyl Derivative NFEPP Elicit Distinct Hydrogen-Bond Dynamics of the Opioid Receptor. J. Chem. Inf. Model. 63 (15) (2023)
Éva Bertalan, Elena Lesca, Gebhard F. X. Schertler, Ana-Nicoleta Bondar
C-Graphs Tool with Graphical User Interface to Dissect Conserved Hydrogen-Bond Networks: Applications to Visual Rhodopsins. J. Chem. Inf. Model. 61 (11) (2021)
Thomas Giannos, Samo Lesnik, Urban Bren, Milan Hodoscek, Tatiana Domratcheva, Ana-Nicoleta Bondar
CHARMM Force-Field Parameters for Morphine, Heroin, and Oliceridine, and Conformational Dynamics of Opioid Drugs. J. Chem. Inf. Model. 61 (8) (2021)
Malte Siemers, Ana-Nicoleta Bondar
Interactive Interface for Graph-Based Analyses of Dynamic H-Bond Networks: Application to Spike Protein S. J. Chem. Inf. Model. 61 (6) (2021)
Oskar Klaja, James A. Frank, Dirk Trauner, Ana-Nicoleta Bondar
Potential energy function for a photo-switchable lipid molecule. J. Comput. Chem. 41 (27) (2020)
Oskar Klaja, James A. Frank, Dirk Trauner, Ana-Nicoleta Bondar
Cover Image. J. Comput. Chem. 41 (27) (2020)
Samo Lesnik, Milan Hodoscek, Urban Bren, Christoph Stein, Ana-Nicoleta Bondar
Potential Energy Function for Fentanyl-Based Opioid Pain Killers. J. Chem. Inf. Model. 60 (7) (2020)
Konstantina Karathanou, Ana-Nicoleta Bondar
Using Graphs of Dynamic Hydrogen-Bond Networks To Dissect Conformational Coupling in a Protein Motor. J. Chem. Inf. Model. 59 (5) (2019)
Suliman Adam, Michaela Knapp-Mohammady, Jun Yi, Ana-Nicoleta Bondar
Revised CHARMM force field parameters for iron-containing cofactors of photosystem II. J. Comput. Chem. 39 (1) (2018)
Norbert Lindow, Daniel Baum, Ana-Nicoleta Bondar, Hans-Christian Hege
Exploring cavity dynamics in biomolecular systems. BMC Bioinform. 14 (S-19) (2013)
Norbert Lindow, Daniel Baum, Ana-Nicoleta Bondar, Hans-Christian Hege
Dynamic channels in biomolecular systems: Path analysis and visualization. BioVis (2012)