Amir Alavi

Publication Activity (10 Years)

Years Active: 2017-2021
Publications (10 Years): 7

Top Topics

Protein Protein Interaction Networks

Biological Processes

Graphics Processing Units

Top Venues

PLoS Comput. Biol.

J. Comput. Biol.

Publications

Amir Bahmani, Kyle Ferriter, Vandhana Krishnan, Arash Alavi, Amir Alavi, Philip S. Tsao, Michael P. Snyder, Cuiping Pan
Swarm: A federated cloud framework for large-scale variant analysis. PLoS Comput. Biol. 17 (5) (2021)
Songwei Ge, Haohan Wang, Amir Alavi, Eric P. Xing, Ziv Bar-Joseph
Supervised Adversarial Alignment of Single-Cell RNA-seq Data. J. Comput. Biol. 28 (5) (2021)
Amir Bahmani, Ziye Xing, Vandhana Krishnan, Utsab Ray, Frank Mueller, Amir Alavi, Philip S. Tsao, Michael P. Snyder, Cuiping Pan
Hummingbird: efficient performance prediction for executing genomic applications in the cloud. Bioinform. 37 (17) (2021)
M. Z. Naser, Amir Alavi
Insights into Performance Fitness and Error Metrics for Machine Learning. CoRR (2020)
Songwei Ge, Haohan Wang, Amir Alavi, Eric P. Xing, Ziv Bar-Joseph
Supervised Adversarial Alignment of Single-Cell RNA-seq Data. RECOMB (2020)
Amir Alavi, Ziv Bar-Joseph
Iterative point set registration for aligning scRNA-seq data. PLoS Comput. Biol. 16 (10) (2020)
Raghuram Thiagarajan, Amir Alavi, Jagdeep T. Podichetty, Jason N. Bazil, Daniel A. Beard
The feasibility of genome-scale biological network inference using Graphics Processing Units. Algorithms Mol. Biol. 12 (1) (2017)