Alin Dobra

Publication Activity (10 Years)

Years Active: 2001-2023
Publications (10 Years): 10

Top Topics

Protein Interaction Networks

Reachability Analysis

Nearest Neighbor Classifier

Top Venues

IEEE ACM Trans. Comput. Biol. Bioinform.

Proc. VLDB Endow.

Publications

Richard Bailey, Aisharjya Sarkar, Aaditya Singh, Alin Dobra, Tamer Kahveci
Optimal Supervised Reduction of High Dimensional Transcription Data. IEEE ACM Trans. Comput. Biol. Bioinform. 20 (5) (2023)
Aisharjya Sarkar, Aaditya Singh, Richard Bailey, Alin Dobra, Tamer Kahveci
Optimal separation of high dimensional transcriptome for complex multigenic traits. BCB (2022)
Yuanfang Ren, Aisharjya Sarkar, Pierangelo Veltri, Ahmet Ay, Alin Dobra, Tamer Kahveci
Pattern Discovery in Multilayer Networks. IEEE ACM Trans. Comput. Biol. Bioinform. 19 (2) (2022)
Yuanfang Ren, Aisharjya Sarkar, Aysegul Bumin, Kejun Huang, Pierangelo Veltri, Alin Dobra, Tamer Kahveci
Identification of co-existing embeddings of a motif in multilayer networks. BCB (2022)
Yuanfang Ren, Ahmet Ay, Alin Dobra, Tamer Kahveci
Characterizing building blocks of resource constrained biological networks. BMC Bioinform. (12) (2019)
Yuanfang Ren, Aisharjya Sarkar, Ahmet Ay, Alin Dobra, Tamer Kahveci
Finding Conserved Patterns in Multilayer Networks. BCB (2019)
Yuanfang Ren, Ahmet Ay, Alin Dobra, Tamer Kahveci
Characterizing Building Blocks of Resource Constrained Biological Networks. BCB (2018)
Adam Bates, Wajih Ul Hassan, Kevin R. B. Butler, Alin Dobra, Bradley Reaves, Patrick T. Cable II, Thomas Moyer, Nabil Schear
Transparent Web Service Auditing via Network Provenance Functions. WWW (2017)
Kun Li, Xiaofeng Zhou, Daisy Zhe Wang, Christan Earl Grant, Alin Dobra, Christopher Dudley
In-database batch and query-time inference over probabilistic graphical models using UDA-GIST. VLDB J. 26 (2) (2017)
Adam Bates, Kevin R. B. Butler, Alin Dobra, Bradley Reaves, Patrick T. Cable II, Thomas Moyer, Nabil Schear
Retrofitting Applications with Provenance-Based Security Monitoring. CoRR (2016)
Kun Li, Daisy Zhe Wang, Alin Dobra, Christopher Dudley
UDA-GIST: An In-database Framework to Unify Data-Parallel and State-Parallel Analytics. Proc. VLDB Endow. 8 (5) (2015)
Haitham Gabr, Andrei Todor, Alin Dobra, Tamer Kahveci
Reachability Analysis in Probabilistic Biological Networks. IEEE ACM Trans. Comput. Biol. Bioinform. 12 (1) (2015)
Andrei Todor, Alin Dobra, Tamer Kahveci
Counting motifs in probabilistic biological networks. BCB (2015)
Haitham Gabr, Alin Dobra, Tamer Kahveci
Estimating reachability in dense biological networks. BCB (2015)
Andrei Todor, Haitham Gabr, Alin Dobra, Tamer Kahveci
Large scale analysis of signal reachability. Bioinform. 30 (12) (2014)
Andrei Todor, Alin Dobra, Tamer Kahveci
Characterizing the Topology of Probabilistic Biological Networks. IEEE ACM Trans. Comput. Biol. Bioinform. 10 (4) (2013)
Supriya Nirkhiwale, Alin Dobra, Chris Jermaine
A Sampling Algebra for Aggregate Estimation. CoRR (2013)
Lixia Chen, Alin Dobra
Histograms as statistical estimators for aggregate queries. Inf. Syst. 38 (2) (2013)
Andrei Todor, Alin Dobra, Tamer Kahveci, Christopher Dudley
Making massive probabilistic databases practical. CoRR (2013)
Amit Dhurandhar, Alin Dobra
Probabilistic characterization of nearest neighbor classifier. Int. J. Mach. Learn. Cybern. 4 (4) (2013)
Supriya Nirkhiwale, Alin Dobra, Christopher M. Jermaine
A Sampling Algebra for Aggregate Estimation. Proc. VLDB Endow. 6 (14) (2013)
Haitham Gabr, Andrei Todor, Helia Zandi, Alin Dobra, Tamer Kahveci
PReach: Reachability in Probabilistic Signaling Networks. BCB (2013)
Andrei Todor, Haitham Gabr, Alin Dobra, Tamer Kahveci
Reachability analysis in large probabilistic biological networks. BCB (2013)
Haitham Gabr, Alin Dobra, Tamer Kahveci
From Uncertain Protein Interaction Networks to Signaling Pathways Through Intensive Color Coding. Pacific Symposium on Biocomputing (2013)
Andrei Todor, Alin Dobra, Tamer Kahveci
Probabilistic Biological Network Alignment. IEEE ACM Trans. Comput. Biol. Bioinform. 10 (1) (2013)
Florin Rusu, Alin Dobra
GLADE: a scalable framework for efficient analytics. ACM SIGOPS Oper. Syst. Rev. 46 (1) (2012)
Andrei Todor, Alin Dobra, Tamer Kahveci
Uncertain interactions affect degree distribution of biological networks. BIBM (2012)
Amit Dhurandhar, Alin Dobra
Distribution-free bounds for relational classification. Knowl. Inf. Syst. 31 (1) (2012)
Subi Arumugam, Alin Dobra, Christopher M. Jermaine, Niketan Pansare, Luis Leopoldo Perez
The DataPath system: a data-centric analytic processing engine for large data warehouses. SIGMOD Conference (2010)
Florin Rusu, Alin Dobra
Sketching Sampled Data Streams. ICDE (2009)
Alin Dobra, Minos N. Garofalakis, Johannes Gehrke, Rajeev Rastogi
Multi-query optimization for sketch-based estimation. Inf. Syst. 34 (2) (2009)
Laukik Chitnis, Alin Dobra, Sanjay Ranka
Analyzing the techniques that improve fault tolerance of aggregation trees in sensor networks. J. Parallel Distributed Comput. 69 (12) (2009)
Amit Dhurandhar, Alin Dobra
Semi-analytical method for analyzing models and model selection measures based on moment analysis. ACM Trans. Knowl. Discov. Data 3 (1) (2009)
Alin Dobra, Chris Jermaine, Florin Rusu, Fei Xu
Turbo-Charging Estimate Convergence in DBO. Proc. VLDB Endow. 2 (1) (2009)
Laukik Chitnis, Alin Dobra, Sanjay Ranka
Fault tolerant aggregation in heterogeneous sensor networks. J. Parallel Distributed Comput. 69 (2) (2009)
Laukik Chitnis, Alin Dobra, Sanjay Ranka
Aggregation methods for large-scale sensor networks. ACM Trans. Sens. Networks 4 (2) (2008)
Florin Rusu, Fei Xu, Luis Leopoldo Perez, Mingxi Wu, Ravi Jampani, Chris Jermaine, Alin Dobra
The DBO database system. SIGMOD Conference (2008)
Fei Xu, Christopher M. Jermaine, Alin Dobra
Confidence bounds for sampling-based group by estimates. ACM Trans. Database Syst. 33 (3) (2008)
Florin Rusu, Alin Dobra
Sketches for size of join estimation. ACM Trans. Database Syst. 33 (3) (2008)
Chris Jermaine, Subramanian Arumugam, Abhijit Pol, Alin Dobra
Scalable approximate query processing with the DBO engine. ACM Trans. Database Syst. 33 (4) (2008)
Florin Rusu, Alin Dobra
Statistical analysis of sketch estimators. SIGMOD Conference (2007)
Florin Rusu, Alin Dobra
Pseudo-random number generation for sketch-based estimations. ACM Trans. Database Syst. 32 (2) (2007)
Ye Xia, Alin Dobra, Seung Chul Han
Multiple-Choice Random Network for Server Load Balancing. INFOCOM (2007)
Christopher M. Jermaine, Subramanian Arumugam, Abhijit Pol, Alin Dobra
Scalable approximate query processing with the DBO engine. SIGMOD Conference (2007)
Florin Rusu, Alin Dobra
Fast range-summable random variables for efficient aggregate estimation. SIGMOD Conference (2006)
Chris Jermaine, Alin Dobra, Subramanian Arumugam, Shantanu Joshi, Abhijit Pol
The Sort-Merge-Shrink join. ACM Trans. Database Syst. 31 (4) (2006)
Chris Jermaine, Alin Dobra, Subramanian Arumugam, Shantanu Joshi, Abhijit Pol
A Disk-Based Join With Probabilistic Guarantees. SIGMOD Conference (2005)
Chris Jermaine, Alin Dobra, Abhijit Pol, Shantanu Joshi
Online Estimation For Subset-Based SQL Queries. VLDB (2005)
Alin Dobra
Histograms revisited: when are histograms the best approximation method for aggregates over joins? PODS (2005)
Alin Dobra, Minos N. Garofalakis, Johannes Gehrke, Rajeev Rastogi
Sketch-Based Multi-query Processing over Data Streams. EDBT (2004)
David Kempe, Alin Dobra, Johannes Gehrke
Gossip-Based Computation of Aggregate Information. FOCS (2003)
Alin Dobra, Minos N. Garofalakis, Johannes Gehrke, Rajeev Rastogi
Processing complex aggregate queries over data streams. SIGMOD Conference (2002)
Alin Dobra, Johannes Gehrke
SECRET: a scalable linear regression tree algorithm. KDD (2002)
Alin Dobra, Johannes Gehrke
Bias Correction in Classification Tree Construction. ICML (2001)