Adelinde M. Uhrmacher

ORCID

Publication Activity (10 Years)

Years Active: 1995-2024
Publications (10 Years): 75

Top Venues

WSC

SIGSIM-PADS

ACM Trans. Model. Comput. Simul.

CoRR

University of Koblenz-Landau, Germany (PHD)

Education History

University of Koblenz-Landau, Germany

PHD

Publications

Justin Noah Kreikemeyer, Philipp Andelfinger, Adelinde M. Uhrmacher
Towards Learning Stochastic Population Models by Gradient Descent. CoRR (2024)
Philipp Andelfinger, Adelinde M. Uhrmacher
Synchronous speculative simulation of tightly coupled agents in continuous time on CPUs and GPUs. Simul. 100 (1) (2024)
Till Köster, Oliver Reinhardt, Martin Hinsch, Jakub Bijak, Adelinde M. Uhrmacher
A Fast Embedded Language for Continuous-Time Agent-Based Simulation. J. Artif. Soc. Soc. Simul. 27 (1) (2024)
Justin Noah Kreikemeyer, Philipp Andelfinger, Adelinde M. Uhrmacher
Towards Learning Stochastic Population Models by Gradient Descent. SIGSIM-PADS (2024)
Pia Wilsdorf, Marian Zuska, Philipp Andelfinger, Adelinde M. Uhrmacher, Florian Peters
Validation Without Data - Formalizing Stylized Facts Of Time Series. WSC (2023)
Philipp Andelfinger, Till Köster, Adelinde M. Uhrmacher
Zero Lookahead? Zero Problem. The Window Racer Algorithm. SIGSIM-PADS (2023)
Pia Wilsdorf, Anton Willy Kirchhübel, Adelinde M. Uhrmacher
NBSIMGEN: Jupyter Notebook Extension for Generating Simulation Experiments. WSC (2023)
Adelinde M. Uhrmacher, Peter I. Frazier, Reiner Hähnle, Franziska Klügl, Fabian Lorig, Bertram Ludäscher, Laura Nenzi, Cristina Ruiz Martin, Bernhard Rumpe, Claudia Szabo, Gabriel A. Wainer, Pia Wilsdorf
Context, Composition, Automation, and Communication - The C2AC Roadmap for Modeling and Simulation. CoRR (2023)
Till Köster, Adelinde M. Uhrmacher
Efficient Execution for Domain Specific Languages: Comparing Two Approaches for Demography and Cellular Biology. SIGSIM-PADS (2023)
Pia Wilsdorf, Anja Wolpers, Jason Hilton, Fiete Haack, Adelinde M. Uhrmacher
Automatic Reuse, Adaption, and Execution of Simulation Experiments via Provenance Patterns. ACM Trans. Model. Comput. Simul. 33 (2023)
Kevin Haase, Harry V. Strehlow, Wolf-Christian Lewin, Oliver Reinhardt, Adelinde M. Uhrmacher
Site Choice in Recreational Fisheries - Towards an Agent-Based Approach. WSC (2022)
Andreas Ruscheinski, Pia Wilsdorf, Julius Zimmermann, Ursula van Rienen, Adelinde M. Uhrmacher
An artefact-based workflow for finite element simulation studies. Simul. Model. Pract. Theory 116 (2022)
Till Köster, Tom Warnke, Adelinde M. Uhrmacher
Generating Fast Specialized Simulators for Stochastic Reaction Networks via Partial Evaluation. ACM Trans. Model. Comput. Simul. 32 (2) (2022)
Pia Wilsdorf, Adelinde M. Uhrmacher
Creating PROV-DM Graphs from Model Databases. WSC (2022)
Tom Meyer, Philipp Andelfinger, Andreas Ruscheinski, Adelinde M. Uhrmacher
Seamless Simulation-Based Verification and Validation of Event-Driven Software Systems. WSC (2022)
Wentong Cai, Christopher D. Carothers, David M. Nicol, Adelinde M. Uhrmacher
Computer Science Methods for Effective and Sustainable Simulation Studies (Dagstuhl Seminar 22401). Dagstuhl Reports 12 (10) (2022)
Oliver Reinhardt, Tom Warnke, Adelinde M. Uhrmacher
A Language for Agent-based Discrete-event Modeling and Simulation of Linked Lives. ACM Trans. Model. Comput. Simul. 32 (1) (2022)
Philipp Andelfinger, Andrea Piccione, Alessandro Pellegrini, Adelinde M. Uhrmacher
Comparing Speculative Synchronization Algorithms for Continuous-Time Agent-Based Simulations. DS-RT (2022)
Till Köster, Adelinde M. Uhrmacher, Philipp Andelfinger
Towards an Open Repository for Reproducible Performance Comparison of Parallel and Distributed Discrete-Event Simulators. SIGSIM-PADS (2022)
Till Köster, Leon Herrmann, Philipp Andelfinger, Adelinde M. Uhrmacher
GPU-Accelerated Simulation Ensembles of Stochastic Reaction Networks. WSC (2022)
Jakub Bijak, Jason Hilton, Martin Hinsch, Kim Lipscombe, Sarah Nurse, Toby Prike, Peter W. F. Smith, Oliver Reinhardt, Adelinde M. Uhrmacher, Philip A. Higham, André Grow
Teaching a Modeling Process: Reflections From An Online Course. WSC (2021)
Kristina Heß, Jan Himmelspach, Oliver Reinhardt, Adelinde M. Uhrmacher
A Generalized Network Generation Approach for Agent-Based Models. WSC (2021)
Andreas Ruscheinski, Anna Lena Reimler, Roland Ewald, Adelinde M. Uhrmacher
VPMBench: a test bench for variant prioritization methods. BMC Bioinform. 22 (1) (2021)
Pia Wilsdorf, Anja Wolpers, Jason Hilton, Fiete Haack, Adelinde M. Uhrmacher
Automatic Reuse, Adaption, and Execution of Simulation Experiments via Provenance Patterns. CoRR (2021)
Kai Budde, Jacob Smith, Pia Wilsdorf, Fiete Haack, Adelinde M. Uhrmacher
Relating simulation studies by provenance - Developing a family of Wnt signaling models. PLoS Comput. Biol. 17 (8) (2021)
Tom Warnke, Adelinde M. Uhrmacher
Nonlinear Pattern Matching in Rule-Based Modeling Languages. CMSB (2021)
Pia Wilsdorf, Nadine Fischer, Fiete Haack, Adelinde M. Uhrmacher
Exploiting Provenance and Ontologies In Supporting Best Practices For Simulation Experiments: A Case Study On Sensitivity Analysis. WSC (2021)
Daniel Foguelman, Philipp Henning, Adelinde M. Uhrmacher, Rodrigo D. Castro
EB-DEVS: A formal framework for modeling and simulation of emergent behavior in dynamic complex systems. J. Comput. Sci. 53 (2021)
Justin Noah Kreikemeyer, Till Köster, Adelinde M. Uhrmacher, Tom Warnke
Inferring Dependency Graphs for Agent-Based Models Using Aspect-Oriented Programming. WSC (2021)
Philipp Andelfinger, Adelinde M. Uhrmacher
Optimistic Parallel Simulation of Tightly Coupled Agents in Continuous Time. DS-RT (2021)
Tom Meyer, Andreas Ruscheinski, Pia Wilsdorf, Adelinde M. Uhrmacher
Simulation-Supported Engineering of Self-Adaptive Software Systems. WSC (2021)
Andreas Ruscheinski, Tom Warnke, Adelinde M. Uhrmacher
Artifact-Based Workflows for Supporting Simulation Studies. IEEE Trans. Knowl. Data Eng. 32 (6) (2020)
Justin Noah Kreikemeyer, Jane Hillston, Adelinde M. Uhrmacher
Probing the Performance of the Edinburgh Bike Sharing System using SSTL. SIGSIM-PADS (2020)
Andreas Ruscheinski, Pia Wilsdorf, Julius Zimmermann, Ursula van Rienen, Adelinde M. Uhrmacher
An Artifact-based Workflow for Finite-Element Simulation Studies. CoRR (2020)
Andreas Ruscheinski, Anja Wolpers, Philipp Henning, Tom Warnke, Fiete Haack, Adelinde M. Uhrmacher
Pragmatic Logic-Based Spatio-Temporal Pattern Checking in Particle-Based Models. WSC (2020)
Daniel J. Foguelman, Philipp Henning, Adelinde M. Uhrmacher, Rodrigo D. Castro
EB-DEVS: A Formal Framework for Modeling and Simulation of Emergent Behavior in Dynamic Complex Systems. CoRR (2020)
Pia Wilsdorf, Fiete Haack, Adelinde M. Uhrmacher
Conceptual Models in Simulation Studies: Making it Explicit. WSC (2020)
Jakub Bijak, Philip A. Higham, Jason Hilton, Martin Hinsch, Sarah Nurse, Toby Prike, Peter W. F. Smith, Oliver Reinhardt, Adelinde M. Uhrmacher
Modelling Migration: Decisions, Processes and Outcomes. WSC (2020)
Till Köster, Tom Warnke, Adelinde M. Uhrmacher
Partial Evaluation via Code Generation for Static Stochastic Reaction Network Models. SIGSIM-PADS (2020)
Till Köster, Philippe J. Giabbanelli, Adelinde M. Uhrmacher
Performance and Soundness of Simulation: A Case Study Based on a Cellular Automaton for In-Body Spread of HIV. WSC (2020)
Andreas Ruscheinski, Pia Wilsdorf, Marcus Dombrowsky, Adelinde M. Uhrmacher
Capturing and Reporting Provenance Information of Simulation Studies Based on an Artifact-Based Workflow Approach. SIGSIM-PADS (2019)
Oliver Reinhardt, Adelinde M. Uhrmacher, Martin Hinsch, Jakub Bijak
Developing Agent-Based Migration Models in Pairs. WSC (2019)
Kai Budde, Julius Zimmermann, Elisa Neuhaus, Max Schröder, Adelinde M. Uhrmacher, Ursula van Rienen
Requirements for Documenting Electrical Cell Stimulation Experiments for Replicability and Numerical Modeling. EMBC (2019)
Till Köster, Philipp Henning, Adelinde M. Uhrmacher
Potential based, spatial simulation of dynamically nested particles. BMC Bioinform. 20 (1) (2019)
Max Schröder, Hendrikje Raben, Frank Krüger, Andreas Ruscheinski, Ursula van Rienen, Adelinde M. Uhrmacher, Sascha Spors
PROVenance Patterns in Numerical Modelling and Finite Element Simulation Processes of Bio-electric Systems. EMBC (2019)
Tom Warnke, Adelinde M. Uhrmacher
Reproducible parallel simulation experiments via pure functional programming. DS-RT (2019)
Pia Wilsdorf, Marcus Dombrowsky, Adelinde M. Uhrmacher, Julius Zimmermann, Ursula van Rienen
Simulation Experiment Schemas -Beyond Tools and Simulation Approaches. WSC (2019)
Pia Wilsdorf, Maria E. Pierce, Jane Hillston, Adelinde M. Uhrmacher
Round-based Super-Individuals - Balancing Speed and Accuracy. SIGSIM-PADS (2019)
Tom Warnke, Tobias Helms, Adelinde M. Uhrmacher
Reproducible and flexible simulation experiments with ML-Rules and SESSL. Bioinform. 34 (8) (2018)
Tobias Helms, Pia Wilsdorf, Adelinde M. Uhrmacher
Hybrid Simulation of Dynamic Reaction Networks in Multi-Level Models. SIGSIM-PADS (2018)
Till Köster, Adelinde M. Uhrmacher
Handling Dynamic Sets of Reactions in Stochastic Simulation Algorithms. SIGSIM-PADS (2018)
Adelinde M. Uhrmacher
Keynote Speaker: Credible Simulation Models - Provenance beyond Reproducibility. DS-RT (2018)
Maria E. Pierce, Uwe Krumme, Adelinde M. Uhrmacher
Building simulation Models of Complex ecological Systems by Successive Composition and Reusing simulation Experiments. WSC (2018)
Tom Meyer, Tobias Helms, Tom Warnke, Adelinde M. Uhrmacher
Runtime Code Generation for Interpreted Domain-Specific Modeling Languages. WSC (2018)
Oliver Reinhardt, Andreas Ruscheinski, Adelinde M. Uhrmacher
Odd+p: complementing the odd Protocol with Provenance Information. WSC (2018)
Oliver Reinhardt, Jason Hilton, Tom Warnke, Jakub Bijak, Adelinde M. Uhrmacher
Streamlining Simulation Experiments with Agent-Based Models in Demography. J. Artif. Soc. Soc. Simul. 21 (3) (2018)
Andreas Ruscheinski, Dragana Gjorgevikj, Marcus Dombrowsky, Kai Budde, Adelinde M. Uhrmacher
Towards a PROV Ontology for Simulation Models. IPAW (2018)
Andreas Ruscheinski, Kai Budde, Tom Warnke, Pia Wilsdorf, Bjarne C. Hiller, Marcus Dombrowsky, Adelinde M. Uhrmacher
Generating simulation Experiments based on Model Documentations and Templates. WSC (2018)
Tom Warnke, Adelinde M. Uhrmacher
Complex simulation Experiments Made Easy. WSC (2018)
Simon J. E. Taylor, Tillal Eldabi, Thomas Monks, Markus Rabe, Adelinde M. Uhrmacher
Crisis, What Crisis - does reproducibility in Modeling & simulation Really Matter? WSC (2018)
Arne T. Bittig, Adelinde M. Uhrmacher
ML-Space: Hybrid Spatial Gillespie and Particle Simulation of Multi-Level Rule-Based Models in Cell Biology. IEEE ACM Trans. Comput. Biol. Bioinform. 14 (6) (2017)
Till Köster, Kalyan S. Perumalla, Adelinde M. Uhrmacher
Efficient Simulation of Nested Hollow Sphere Intersections: for Dynamically Nested Compartmental Models in Cell Biology. SIGSIM-PADS (2017)
Tobias Helms, Tom Warnke, Carsten Maus, Adelinde M. Uhrmacher
Semantics and Efficient Simulation Algorithms of an Expressive Multilevel Modeling Language. ACM Trans. Model. Comput. Simul. 27 (2) (2017)
Danhua Peng, Tom Warnke, Fiete Haack, Adelinde M. Uhrmacher
-catenin signaling pathway. Simul. 93 (8) (2017)
Oliver Reinhardt, Adelinde M. Uhrmacher
An efficient simulation algorithm for continuous-time agent-based linked lives models. SpringSim (ANSS) (2017)
Andreas Ruscheinski, Adelinde M. Uhrmacher
Provenance in modeling and simulation studies - Bridging gaps. WSC (2017)
Kai Budde, Tom Warnke, Adelinde M. Uhrmacher, Eric Schatz, Jens Starke, Fiete Haack
Exploiting equation-free analysis for multi-level, agent-based models in cell biology. WSC (2017)
Tom Warnke, Adelinde M. Uhrmacher
Practical expressiveness of internal and external domain-specific modeling languages. WSC (2017)
Tobias Helms, Steffen Mentel, Adelinde M. Uhrmacher
Dynamic State Space Partitioning for Adaptive Simulation Algorithms. EAI Endorsed Trans. Collab. Comput. 2 (10) (2016)
Adelinde M. Uhrmacher, Sally C. Brailsford, Jason Liu, Markus Rabe, Andreas Tolk
Panel - Reproducible research in discrete event simulation - A must or rather a maybe? WSC (2016)
Danhua Peng, Tom Warnke, Fiete Haack, Adelinde M. Uhrmacher
Reusing simulation experiment specifications to support developing models by successive extension. Simul. Model. Pract. Theory 68 (2016)
Tom Warnke, Adelinde M. Uhrmacher
Spatiotemporal Pattern Matching in RoboCup. MATES (2016)
Tom Warnke, Oliver Reinhardt, Adelinde M. Uhrmacher
Population-based CTMCS and agent-based models. WSC (2016)
Christina Kossow, Tobias Helms, Jan M. Kreutzer, Alke Martens, Adelinde M. Uhrmacher
Evaluating different modeling languages based on a user study. SpringSim (ANSS) (2016)
Alexander Steiniger, Adelinde M. Uhrmacher
Intensional Couplings in Variable-Structure Models: An Exploration Based on Multilevel-DEVS. ACM Trans. Model. Comput. Simul. 26 (2) (2016)
Adelinde M. Uhrmacher
The Role of Domain Specific Languages in Modeling and Simulation. SIMULTECH (2015)
Johannes Schützel, Sebastian Stieber, Christian Haubelt, Adelinde M. Uhrmacher
Targeted on-line data extraction with SystemXtract. SimuTools (2015)
Maria E. Pierce, Tom Warnke, Tobias Helms, Adelinde M. Uhrmacher, Uwe Krumme, Cornelius Hammer
Individual-based cod simulation with ML-Rules. WSC (2015)
Tobias Helms, Roland Ewald, Stefan Rybacki, Adelinde M. Uhrmacher
Automatic Runtime Adaptation for Component-Based Simulation Algorithms. ACM Trans. Model. Comput. Simul. 26 (1) (2015)
Tom Warnke, Tobias Helms, Adelinde M. Uhrmacher
Syntax and Semantics of a Multi-Level Modeling Language. SIGSIM-PADS (2015)
Tobias Helms, Oliver Reinhardt, Adelinde M. Uhrmacher
Bayesian changepoint detection for generic adaptive simulation algorithms. SpringSim (ANSS) (2015)
Fiete Haack, Heiko Lemcke, Roland Ewald, Tareck Rharass, Adelinde M. Uhrmacher
Spatio-temporal Model of Endogenous ROS and Raft-Dependent WNT/Beta-Catenin Signaling Driving Cell Fate Commitment in Human Neural Progenitor Cells. PLoS Comput. Biol. 11 (3) (2015)
Johannes Schützel, Adelinde M. Uhrmacher
Targeted Extraction of Simulation Data. DS-RT (2015)
Tom Warnke, Alexander Steiniger, Adelinde M. Uhrmacher, Anna Klabunde, Frans Willekens
ML3: a language for compact modeling of linked lives in computational demography. WSC (2015)
Gang Guo, Arne T. Bittig, Adelinde M. Uhrmacher
Lattice Monte Carlo simulation of Galilei variant anomalous diffusion. J. Comput. Phys. 288 (2015)
Danhua Peng, Tom Warnke, Adelinde M. Uhrmacher
Domain-Specific Languages for Flexbily Experimenting with Stochastic Models. Simul. Notes Eur. 25 (2) (2015)
Tobias Helms, Carsten Maus, Fiete Haack, Adelinde M. Uhrmacher
Multi-level modeling and simulation of cell biological systems with ML-rules: a tutorial. WSC (2014)
Johannes Schützel, Danhua Peng, Adelinde M. Uhrmacher, L. Felipe Perrone
Perspectives on languages for specifying simulation experiments. WSC (2014)
Johannes Schützel, Holger Meyer, Adelinde M. Uhrmacher
A stream-based architecture for the management and on-line analysis of unbounded amounts of simulation data. SIGSIM-PADS (2014)
David R. Gilbert, Monika Heiner, Koichi Takahashi, Adelinde M. Uhrmacher
Multiscale Spatial Computational Systems Biology (Dagstuhl Seminar 14481). Dagstuhl Reports 4 (11) (2014)
Danhua Peng, Roland Ewald, Adelinde M. Uhrmacher
Towards semantic model composition via experiments. SIGSIM-PADS (2014)
Arne T. Bittig, Claudia Matschegewski, J. Barbara Nebe, Susanne Stählke, Adelinde M. Uhrmacher
Membrane related dynamics and the formation of actin in cells growing on micro-topographies: a spatial computational model. BMC Syst. Biol. 8 (2014)
Alexander Steiniger, Adelinde M. Uhrmacher, Sabine Zinn, Jutta Gampe, Frans Willekens
The role of languages for modeling and simulating continuous-time multi-level models in demography. WSC (2014)
Paul A. Fishwick, Sally C. Brailsford, Simon J. E. Taylor, Andreas Tolk, Adelinde M. Uhrmacher
Modeling for everyone: emphasizing the role of modeling in stem education. WSC (2014)
Roland Ewald, Adelinde M. Uhrmacher
SESSL: A domain-specific language for simulation experiments. ACM Trans. Model. Comput. Simul. 24 (2) (2014)
Stefan Rybacki, Fiete Haack, Karsten Wolf, Adelinde M. Uhrmacher
Developing simulation models - from conceptual to executable model and back - an artifact-based workflow approach. SimuTools (2014)
Arne T. Bittig, Florian Reinhardt, Simone Baltrusch, Adelinde M. Uhrmacher
Predictive Modelling of Mitochondrial Spatial Structure and Health. CMSB (2014)
Mathias John, Hans-Jörg Schulz, Heidrun Schumann, Adelinde M. Uhrmacher, Andrea Unger
Constructing and visualizing chemical reaction networks from pi-calculus models. Formal Aspects Comput. 25 (5) (2013)
Sabine Zinn, Jan Himmelspach, Adelinde M. Uhrmacher, Jutta Gampe
Building Mic-Core, a Specialized M&S Software to Simulate Multi-State Demographic Micro Models, Based on JAMES II, a General M&S Framework. J. Artif. Soc. Soc. Simul. 16 (3) (2013)
Sebastian Nähring, Roland Ewald, Adelinde M. Uhrmacher, Carsten Maus
From standardized modeling formats to modeling languages and back - An exploration based on SBML and ML-Rules. WSC (2013)

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Publication Activity (10 Years)

Top Topics

Top Venues

Adelinde M. Uhrmacher