BioNLP@ACL (Shared Task)

Publications

2013

Jin-Dong Kim, Yue Wang, Yasunori Yamamoto
The Genia Event Extraction Shared Task, 2013 Edition - Overview. BioNLP@ACL (Shared Task) (2013)
Kai Hakala, Sofie Van Landeghem, Tapio Salakoski, Yves Van de Peer, Filip Ginter
EVEX in ST'13: Application of a large-scale text mining resource to event extraction and network construction. BioNLP@ACL (Shared Task) (2013)
Lishuang Li, Yiwen Wang, Degen Huang
Improving Feature-Based Biomedical Event Extraction System by Integrating Argument Information. BioNLP@ACL (Shared Task) (2013)
Makoto Miwa, Sophia Ananiadou
NaCTeM EventMine for BioNLP 2013 CG and PC tasks. BioNLP@ACL (Shared Task) (2013)
Ilknur Karadeniz, Arzucan Özgür
Bacteria Biotope Detection, Ontology-based Normalization, and Relation Extraction using Syntactic Rules. BioNLP@ACL (Shared Task) (2013)
S. V. Ramanan, P. Senthil Nathan
Performance and limitations of the linguistically motivated Cocoa/Peaberry system in a broad biological domain. BioNLP@ACL (Shared Task) (2013)
Mai-Vu Tran, Nigel Collier, Hoang-Quynh Le, Van-Thuy Phi, Thanh-Binh Pham
Exploring a Probabilistic Earley Parser for Event Composition in Biomedical Texts. BioNLP@ACL (Shared Task) (2013)
Claire Nédellec, Robert Bossy, Jin-Dong Kim, Jung-Jae Kim, Tomoko Ohta, Sampo Pyysalo, Pierre Zweigenbaum
Overview of BioNLP Shared Task 2013. BioNLP@ACL (Shared Task) (2013)
Jari Björne, Tapio Salakoski
TEES 2.1: Automated Annotation Scheme Learning in the BioNLP 2013 Shared Task. BioNLP@ACL (Shared Task) (2013)
Haibin Liu, Karin Verspoor, Donald C. Comeau, Andrew MacKinlay, W. John Wilbur
Generalizing an Approximate Subgraph Matching-based System to Extract Events in Molecular Biology and Cancer Genetics. BioNLP@ACL (Shared Task) (2013)
Thomas Provoost, Marie-Francine Moens
Detecting Relations in the Gene Regulation Network. BioNLP@ACL (Shared Task) (2013)
Vincent Claveau
IRISA participation to BioNLP-ST13: lazy-learning and information retrieval for information extraction tasks. BioNLP@ACL (Shared Task) (2013)
Quoc-Chinh Bui, David Campos, Erik M. van Mulligen, Jan A. Kors
A fast rule-based approach for biomedical event extraction. BioNLP@ACL (Shared Task) (2013)
Sampo Pyysalo, Tomoko Ohta, Sophia Ananiadou
Overview of the Cancer Genetics (CG) task of BioNLP Shared Task 2013. BioNLP@ACL (Shared Task) (2013)
Robert Bossy, Philippe Bessières, Claire Nédellec
BioNLP Shared Task 2013 - An overview of the Genic Regulation Network Task. BioNLP@ACL (Shared Task) (2013)
Tomoko Ohta, Sampo Pyysalo, Rafal Rak, Andrew Rowley, Hong-Woo Chun, Sung-Jae Jung, Sung-Pil Choi, Sophia Ananiadou, Jun'ichi Tsujii
Overview of the Pathway Curation (PC) task of BioNLP Shared Task 2013. BioNLP@ACL (Shared Task) (2013)
Robert Bossy, Wiktoria Golik, Zorana Ratkovic, Philippe Bessières, Claire Nédellec
BioNLP shared Task 2013 - An Overview of the Bacteria Biotope Task. BioNLP@ACL (Shared Task) (2013)
Gerold Schneider, Simon Clematide, Tilia Ellendorff, Don Tuggener, Fabio Rinaldi, Gintare Grigonyte
UZH in BioNLP 2013. BioNLP@ACL (Shared Task) (2013)
Jung-jae Kim, Xu Han, Vivian Lee, Dietrich Rebholz-Schuhmann
GRO Task: Populating the Gene Regulation Ontology with events and relations. BioNLP@ACL (Shared Task) (2013)
Sondes Bannour, Laurent Audibert, Henry Soldano
Ontology-based semantic annotation: an automatic hybrid rule-based method. BioNLP@ACL (Shared Task) (2013)
Slavko Zitnik, Marinka Zitnik, Blaz Zupan, Marko Bajec
Extracting Gene Regulation Networks Using Linear-Chain Conditional Random Fields and Rules. BioNLP@ACL (Shared Task) (2013)
Andrew MacKinlay, David Martínez, Antonio Jimeno-Yepes, Haibin Liu, W. John Wilbur, Karin Verspoor
Extracting Biomedical Events and Modifications Using Subgraph Matching with Noisy Training Data. BioNLP@ACL (Shared Task) (2013)
Proceedings of the BioNLP Shared Task 2013 Workshop, Sofia, Bulgaria, August 9, 2013 BioNLP@ACL (Shared Task) (2013)
Pontus Stenetorp, Wiktoria Golik, Thierry Hamon, Donald C. Comeau, Rezarta Islamaj Dogan, Haibin Liu, W. John Wilbur
BioNLP Shared Task 2013: Supporting Resources. BioNLP@ACL (Shared Task) (2013)
Cyril Grouin
Building A Contrasting Taxa Extractor for Relation Identification from Assertions: BIOlogical Taxonomy & Ontology Phrase Extraction System. BioNLP@ACL (Shared Task) (2013)
Xiao Liu, Antoine Bordes, Yves Grandvalet
Biomedical Event Extraction by Multi-class Classification of Pairs of Text Entities. BioNLP@ACL (Shared Task) (2013)
Xuan-Quang Pham, Minh Quang Le, Bao-Quoc Ho
A Hybrid approach for biomedical event extraction. BioNLP@ACL (Shared Task) (2013)
Roland Roller, Mark Stevenson
Identification of Genia Events using Multiple Classifiers. BioNLP@ACL (Shared Task) (2013)

2011