BICoB

Publications

2011

Ashwin Manjunatha, Paul Anderson, Ajith Ranabahu, Amit P. Sheth
Identifying and Implementing the Underlying Operators for Nuclear Magnetic Resonance based Metabolomics Data Analysis. BICoB (2011)
Melissa Pegues, Nicholas Drozda, Seung-yun Kim, Robert Warburton
Krebs Cycle and Glycolysis Petri Net Models and Simulations for Biochemical Education. BICoB (2011)
Tejaswini Narayanan, Shankar Subramaniam
Community Detection in Biological Networks using a Variational Bayes Approach. BICoB (2011)
Juliana C. Correa, Gabriel P. Silva
Parallel BLAST Analysis and Performance Evaluation. BICoB (2011)
Vijender Chaitankar, Preetam Ghosh, Mohamed O. Elasri, Edward J. Perkins
A Scalable Information Theory Based Gene Regulatory Network Inference Method from Time Series and Knock-Out Data. BICoB (2011)
Aysegul Ozkan, Meera Sitharam
EASAL (Efficient Atlasing, Analysis and Search of Molecular Assembly Landscapes). BICoB (2011)
David Thanoon, Marc Garbey, Barbara Bass
Computational Modeling of Breast Conserving Surgery: a Cosmetic Outcome Indicator from Virtual Surgery. BICoB (2011)
Stephen Winters-Hilt
Single Nucleotide Polymorphism Detection via Cheminformatics Analysis of Nanopore-Blockades Engineered for Event Transduction. BICoB (2011)
Pragyan P. Mohanty, Spyros Tragoudas
A Scalable Method for Identifying DNA Substrings Using Functions. BICoB (2011)
Can Akkoç, Tom Johnsten, Ryan G. Benton
Multi-layered Vector Spaces for Classifying and Analyzing Biological Sequences. BICoB (2011)
Kris Sankaran, Siva Sankaran
A Hidden Markov Model Approach to Identifying Novel Functional Modules. BICoB (2011)
Proceedings of the ISCA 3rd International Conference on Bioinformatics and Computational Biology, BICoB-2011, March 23-25, 2011, Holiday Inn Downtown-Superdome, New Orleans, Louisiana, USA BICoB (2011)
Prabha Garg, Anju Sharma, Rajender Kumar, Pawan Gupta, Nilanjan Roy
MSubCellProt: Predicting Protein Multiple Subcellular Localization using Machine Learning. BICoB (2011)
Neal Lewis, Daniel Gruhl, Hui Yang
Extracting Family History Diagnosis from Clinical Texts. BICoB (2011)
Yueh-Jaw Lin, Chu-Jing Soong
Molecular Dynamics-Based Computational Study on Non-Traditional Particle Models for Improved Drug Delivery Rates. BICoB (2011)
Johannes Georg Klotz, Steffen Schober, Martin Bossert
On the Predecessor Problem in Boolean Network Models of Regulatory Networks. BICoB (2011)
Hongbao Cao, Yu-Ping Wang
M-Fish Image Analysis with Improved Adaptive Fuzzy C-Means Clustering Based Segmentation and Sparse Representation Classification. BICoB (2011)
Jorge Júlvez, Marta Z. Kwiatkowska, Gethin Norman, David Parker
A Systematic Approach to Evaluate Sustained Stochastic Oscillations. BICoB (2011)
Corey M. Thibeault, Roger V. Hoang, Frederick C. Harris Jr.
A Novel Multi-GPU Neural Simulator. BICoB (2011)
Raj Singh, Vikas Yadav
An Efficient Approach for Discovering Interesting Patterns from Biomedical Data. BICoB (2011)
Anurag Nagar, Hisham Al-Mubaid
Similarity and Prioritization of Disease Proteins using Path Length Measure. BICoB (2011)
Masakazu Umezawa, Miho Sera, Ken Takeda
A Novel Analysis Tool to Interpret Microarray Results Using Multiple Gene Annotation. BICoB (2011)
Marzieh Khodaee, Vahid Hashemi, Mohammad Aminisharifabad
A Simple Algorithm for Solving the All-Pairs Minimum Value Cut Problem Using DNA Computing. BICoB (2011)
Hongbao Cao, Yu-Ping Wang
Integrated Analysis of Gene Expression and Copy Number Data using Sparse Representation Based Clustering Model. BICoB (2011)
Majid I. Alsagabi, Ahmed H. Tewfik
A Statistical Model for Microarrays and Optimal Detection Techniques. BICoB (2011)
Nuttachat Wisittipanit, Huzefa Rangwala, Masoumeh Sikaroodi, Ali Keshavarzian, Ece A. Mutlu, Patrick Gillevet
Profiling Microbial Communities using SSU rRNA Sequence and LH-PCR Data. BICoB (2011)
Waree Rinsurongkawong, Marc Garbey, Ralph G. Zinner
Drug Combination, The Design and Problem Landscape. BICoB (2011)
Juexin Wang, Fan Zhang, Yan Wang, Yuan Fu, Dong Xu, Yanchun Liang
Identification of Salt Tolerance Genes in Rice from Microarray Data using SVM-RFE. BICoB (2011)
Nashat Mansour, Iman Ghalayini, Sandra Rizk, Mirvat El-Sibai
Evolutionary Algorithm for Predicting All-Atom Protein Structure. BICoB (2011)
Joseph R. Coco, Erik K. Flemington, Christopher M. Taylor
PARSES: A Pipeline for Analysis of RNA-Seq Exogenous Sequences. BICoB (2011)
Colin Kern, Li Liao, K. Vijay-Shanker
Improving Transmembrane Protein Prediction by Increasing the Utilization of Local Information. BICoB (2011)
Sheng Li, Huzefa Rangwala
An Information Theoretic Approach for the Analysis of RNA and DNA Binding Sites. BICoB (2011)
James D. Jackson, Philip J. Hatcher
Efficient Parallel Execution of Sequence Similarity Analysis Via Dynamic Load Balancing. BICoB (2011)
Zeehasham Rasheed, Huzefa Rangwala
TAC-ELM: Metagenomic Taxonomic Classification with Extreme Learning Machines. BICoB (2011)
Hisham Al-Mubaid, Sandeep Gungu
A Learning Approach for Word Sense Disambiguation in the Biomedical Domain. BICoB (2011)
Fahad Saeed, Trairak Pisitkun, Mark A. Knepper, Jason D. Hoffert
Mining Temporal Patterns from iTRAQ Mass Spectrometry(LC-MS/MS) Data. BICoB (2011)
Melissa Pegues, Nicholas Drozda, Seung-yun Kim, Robert Warburton
Modeling and Simulation of Biochemical Processes using Petri Nets: Steroid Hormone Biosynthesis and Action of Aldosterone. BICoB (2011)
Haijun Gong, Qinsi Wang, Paolo Zuliani, James R. Faeder, Michael Lotze
Symbolic Model Checking of Signaling Pathways in Pancreatic Cancer. BICoB (2011)
Guillaume Tran-Son-Tay, Marc Garbey, Mark G. Davies
Hemodynamic Uncertainties of Wall Shear Stress in Major Arteries. BICoB (2011)
Henry Chi-Ming Leung, Shuen-Yi Leung, Carlos Lu Xiang, Siu-Ming Yiu, Francis Yuk-Lun Chin
DMPFinder - Finding Differentiating Pathways with Gaps from Two Groups of Metabolic Networks. BICoB (2011)
Nicholas Drozda, Melissa Pegues, Seung-yun Kim, Robert Warburton
Modeling and Simulation of Steroid Hormone Biosynthesis and Disease State using Petri Nets. BICoB (2011)
Jing Tian, Guiling Sun, Qin Ding, Jinling Huang, Shravanth Oruganti, Boya Xie
AlienG: An Effective Computational Tool for Phylogenomic Identification of Horizontally Transferred Genes. BICoB (2011)

2010