BIBM

Publications

2023

Yuqi Liu, Zhihao Yang, Jinzhong Ning, Zhijun Wang, Ling Luo, Lei Wang, Yin Zhang, Wei Liu, Hongfei Lin, Jian Wang
Joint Biomedical Entity and Relation Extraction Based on Triple Region Vertices. BIBM (2023)
Christopher H. Fok, Wai-Ki Ching, Chi-Wing Wong
The Construction of Sparse Probabilistic Boolean Networks: A Discrete Perspective. BIBM (2023)
Tian-Jian Luo
An efficient domain adaptation framework for cross-subject EEG classification. BIBM (2023)
Xuemiao Zhang, Junfei Liu
Adversarial Training with Comprehensive Objective for Medical Image Report Generation. BIBM (2023)
Sana Basharat, Ramal Hüseynov, Hüseyin Hilmi Kilinç, Burçak Otlu
Prediction of Non-coding Driver Mutations Using Ensemble Learning. BIBM (2023)
Junjie Zhang, Xuan Zang, Hao Chen, Buzhou Tang
E-HMFNet: A Knowledge-Enhanced Hierarchical Molecular Representation Fusion Network for Drug Recommendation. BIBM (2023)
Xinyu He, Xue Han, Shixin Li, Yonggong Ren
Biomedical Event Detection Based on Domain Knowledge Injection and Model Dual Channel Fine-tuning. BIBM (2023)
Areeba Umair, Elio Masciari
Sentiment Analysis based COVID-19 Vaccine Recommender System. BIBM (2023)
Huanfei Wang, Qian Zhu, Jian Pei
Clinical Assessment of Pneumocystosis with MIMIC Data. BIBM (2023)
Leandro González-Montesino, Darian H. Grass-Boada, Rubén Armañnazas
Network Community Detection in Connectomics Data using Graph Theory. BIBM (2023)
Juan Trelles Trabucco, Carla Floricel, Cecilia N. Arighi, Hagit Shatkay, Daniela Raciti, Martin Ringwald, G. Elisabeta Marai
MouseScholar: Evaluating an Image+Text Search System for Biocuration. BIBM (2023)
Qiang Zhang, Juan Liu, Feng Yang, Zhihui Yang, Jing Feng
SLPFA: Protein Structure-Label Embedding Attention Network for Protein Function Annotation. BIBM (2023)
Giorgio Locicero, Salvatore Alaimo, Alfredo Ferro, Alfredo Pulvirenti
MASFENON: Multi-Agent Adaptive Simulation Framework for Evolution in Networks of Networks. BIBM (2023)
Yunzhe Xue, Andrew Hu, Rohit Muralidhar, Justin W. Ady, Advaith Bongu, Usman Roshan
An AI system for evaluating pass fail in fundamentals of laparoscopic surgery from live video in realtime with performative feedback. BIBM (2023)
Charalambos Chrysostomou
Deep Learning-based Phylogenetic Analysis of Influenza Protein Sequences: A Siamese Neural Network Approach. BIBM (2023)
Yucheng Shu, Xuxuan Guan, Bin Xiao, Lihong Qiao, Weisheng Li, Xinbo Gao
Non-rigid Medical Image Registration Based on Unsupervised Self-driven Prior Fusion. BIBM (2023)
Beichen Kang, Yao Zhang, Yun Xiong, Xing Jia, Jianbo Jiao, Ji Li
Bridging the Gap: Cross-modal Knowledge Driven Network for Radiology Report Generation. BIBM (2023)
Mahan Rahimi, Matthew O. Wiens, Jerome Kabakyenga, John Mark Ansermino, Guy Albert Dumont
A Preliminary Investigation into Use of Admission-Recorded Photoplethysmograms for Predicting Hospital Mortality in Children with Confirmed or Suspected Infection in Resource-Poor Settings. BIBM (2023)
Haijun Lei, Jia Zhao, Guanjie Tong, Xinyun Qiu, Huaqiang Su, Baiying Lei
Weakly Supervised Myeloma Cells Segmentation based on Point Annotation. BIBM (2023)
Georges El Khoury, Kabalan Chaccour, Georges Badr, Amir Hajjam El Hassani
Enhanced Classification of Snoring Sounds Using Stacked Classifier Models of Machine Learning with SVM-KNN and Deep Learning with RNN-LSTM. BIBM (2023)
Silvia Pauciullo, Anna Rosa Garbuglia, Verdiana Zulian
The identification of microRNAs associated with immune response pathways modulated by ORF8 during SARS-CoV-2 infection: a preliminary in silico analysis. BIBM (2023)
Haodi Zhang, Jiahong Li, Yichi Wang, Yuanfeng Song
Integrating Automated Knowledge Extraction with Large Language Models for Explainable Medical Decision-Making. BIBM (2023)
Shihao Xia, Jun Meng, Zhaowei Wang, Yu Wang, Haibin Li, Zhaojing Qin, Yushi Luan
A multi-granularity information-enhanced pre-training method for predicting the coding potential of sORFs in plant lncRNAs. BIBM (2023)
Vidya Bommanapally, Mahadevan Subramaniam, Suvarna Talluri, Venkataramana Gadhamshetty, Juneau Jones
Self-Supervised Scribble-based Segmentation of Single Cells in Biofilms. BIBM (2023)
Xiaoyang Xie, Huachen Zhang, Lijuan Yang, Yuqing Hou, Xiaowei He, Fengjun Zhao
Orbital Lymphoproliferative Disorder Diagnosis with Incomplete Multimodal Images based on Self-/Cross-Representation and Hypergraph Ensemble. BIBM (2023)
Leonardo Furia, Matteo Tortora, Paolo Soda, Rosa Sicilia
Exploring Early Stress Detection from Multimodal Time Series with Deep Reinforcement Learning. BIBM (2023)
Roman Snytsar
PairHMM Improvements for Modern Instruction Set Architectures. BIBM (2023)
Yuxing Lu, Rui Peng, Jinzhuo Wang, Bingheng Jiang
MoTIF: a Method for Trustworthy Dynamic Multimodal Learning on Omics. BIBM (2023)
Thulani Hewavithana, Chu Shin Koh, Avleen Kaur, Raymond Spiteri, Isobel Parkin, Lingling Jin
Inference of subgenomes resulting from polyploid events using synteny based dynamic linking and maximum neighbourhood. BIBM (2023)
Jinlong Yu, Lei Zhang, Ning Xu, Lifeng Fa, Kuo Yang
Application of constraint-based frequent closed itemsets Mining in TCM Clinical data Analysis. BIBM (2023)
Danping Zheng, Sihong Liu, Lei Zhang, Jinliang Yang, Jiaheng Shi, Yu Zhang, Xiang Li, Zihan Jia, Qikai Niu, Lin Tong, Huamin Zhang
Study on Traditional Chinese Medical (TCM) Treatment Rules of Swollen-head Infection Based on Data Mining of TCM Classics. BIBM (2023)
Yuefeng Ma, Tengfei Zhang, Zeqi Wu, Xiaochen Mu, Xun Liang, Lanzhen Guo
Multi-view Brain Networks Construction for Alzheimer's Disease Diagnosis. BIBM (2023)
Jie Li, Chong Wang, Zizhen Li, Hao Li, Mingzhu Sun, Xin Zhao
HiSwin UT: Hybrid Swin Transformers Network for Segmenting 3D in vivo Two-photon Images of Rodent Cerebrovasculature. BIBM (2023)
Xupeng Kou, Hongcheng Xue, Yakun Yang, Longhe Wang, Lin Li
A Hounsfiled Unit Grayscale Adaptive Segmentation Network for Kidney Tumor Surgery. BIBM (2023)
Bing-Xue Du, Haoyang Yu, Bei Zhu, Yahui Long, Min Wu, Jian-Yu Shi
GELKcat: An Integration Learning of Substrate Graph with Enzyme Embedding for Kcat prediction. BIBM (2023)
Jianing Zhang, Jing Gao, Zhikui Chen, Junyang Zhou, Yingshu Liu, Peng Li
A Latent Adversarial Cauchy-Schwarz Autoencoder for Medical Image Segmentation. BIBM (2023)
Xingyue Huo, Joseph Finkelstein
Analyzing Diagnostic Discrepancies in Emergency Department Using the TriNetX Big Data. BIBM (2023)
Sadiq Alinsaif
Leveraging Random Forest and Graph-based Centralities to Predict Yeast Essential Genes. BIBM (2023)
Min Xie, Yi Zhang, Xinyang Li, Yiji Mao, Xingyu Zou, Haixian Zhang
Predicting Lymph Node Metastasis of Colorectal Cancer in CT Scans Using Attention-Based Multiple Instance Learning. BIBM (2023)
Kostas M. Tsiouris, Grigorios Kalliatakis, Ketti Mazzocco, Bostjan Seruga, Kostas Marias, Georgia S. Karanasiou, Athos Antoniades, Andri Papakonstantinou, Constanza Conti, Manolis Tsiknakis, Stelios Sfakianakis, Lampros Lakkas, Gerasimos Filippatos, Anca I. D. Bucur, Dimitrios I. Fotiadis, Georgios C. Manikis, Davide Mauri, Anastasia Constantinidou, Elsa Pacella
. BIBM (2023)
Pietro Hiram Guzzi, Mattia Cannistrà, Raffaele Giancotti, Ugo Lomoio, Barbara Puccio, Patrizia Vizza, Giuseppe Tradigo, Pierangelo Veltri
Annotating omics Data with sex and age of samples: Enabling powerful omics studies. BIBM (2023)
Yaning Li, Xiaodong Yang, Yiqiang Chen, Shubai Chen, Bixiao Zeng, Hong Cai
Adaptive Multi-modal Data Fusion Method for Dermatosis Diagnosis. BIBM (2023)
Weiyang Chen, Ning Li
Prediction of the Caenorhabditis elegans body posture and strains. BIBM (2023)
Han Wang, Jingtong Zhao, Shengkun Wang, Zhiquan He, Xike Ouyang, Ting Gao
Predicting Protein-Ligand Binding Affinity with Multi-Scale Structural Features. BIBM (2023)
Yuan Liu, Zhe Qu, Shu Wang, Tao Sheng, Xiaoqing Yu, Jian-xin Wang
Personalized federated adaptive regularization for heterogeneous medical image classification: COVID-19 CT results. BIBM (2023)
Xuhao Shan, Xinyang Li, Ruiquan Ge, Shibin Wu, Ahmed Elazab, Jichao Zhu, Lingyan Zhang, Gangyong Jia, Qingying Xiao, Xiang Wan, Changmiao Wang
GCS-ICHNet: Assessment of Intracerebral Hemorrhage Prognosis using Self-Attention with Domain Knowledge Integration. BIBM (2023)
Melisa Ece Zeylan, Attila Gursoy, Simge Senyuz, Ozlem Keskin
The interaction between mutated DYRK1A and APP suggests a potential target for vascular cognitive impairment. BIBM (2023)
Wenting Ye, Chen Li, Yang Xie, Wen Zhang, Hong-Yu Zhang, Bowen Wang, Debo Cheng, Zaiwen Feng
Causal Intervention for Measuring Confidence in Drug-Target Interaction Prediction. BIBM (2023)
Ting Long, Tingguan Sun, Juan Liu, Hua Chen, Zhijun Sun
Predicting Tertiary Lymphoid Structures in Head and Neck Contrast-Enhanced CT Images using a 3D CNN. BIBM (2023)
Siqi Xiao, Zhiming Dai
CSIFNet: Deep multimodal network based on cellular spatial information fusion for survival prediction. BIBM (2023)