BioNLP

Publications

2020

Hillel Taub-Tabib, Micah Shlain, Shoval Sadde, Dan Lahav, Matan Eyal, Yaara Cohen, Yoav Goldberg
Interactive Extractive Search over Biomedical Corpora. BioNLP (2020)
Jay DeYoung, Eric Lehman, Benjamin E. Nye, Iain James Marshall, Byron C. Wallace
Evidence Inference 2.0: More Data, Better Models. BioNLP (2020)
Yuxia Wang, Fei Liu, Karin Verspoor, Timothy Baldwin
Evaluating the Utility of Model Configurations and Data Augmentation on Clinical Semantic Textual Similarity. BioNLP (2020)
Anthony Rios, Reenam Joshi, Hejin Shin
Quantifying 60 Years of Gender Bias in Biomedical Research with Word Embeddings. BioNLP (2020)
Isar Nejadgholi, Kathleen C. Fraser, Berry de Bruijn
Extensive Error Analysis and a Learning-Based Evaluation of Medical Entity Recognition Systems to Approximate User Experience. BioNLP (2020)
Amandalynne Paullada, Bethany Percha, Trevor Cohen
Improving Biomedical Analogical Retrieval with Embedding of Structural Dependencies. BioNLP (2020)
Saadullah Amin, Katherine Ann Dunfield, Anna Vechkaeva, Guenter Neumann
A Data-driven Approach for Noise Reduction in Distantly Supervised Biomedical Relation Extraction. BioNLP (2020)
Yifan Peng, Qingyu Chen, Zhiyong Lu
An Empirical Study of Multi-Task Learning on BERT for Biomedical Text Mining. BioNLP (2020)
Bhanu Pratap Singh Rawat, Wei-Hung Weng, So Yeon Min, Preethi Raghavan, Peter Szolovits
Entity-Enriched Neural Models for Clinical Question Answering. BioNLP (2020)
Brian Hur, Timothy Baldwin, Karin Verspoor, Laura Hardefeldt, James Gilkerson
Domain Adaptation and Instance Selection for Disease Syndrome Classification over Veterinary Clinical Notes. BioNLP (2020)
Anna Koroleva, Sanjay Kamath, Patrick Bossuyt, Patrick Paroubek
DeSpin: a prototype system for detecting spin in biomedical publications. BioNLP (2020)
Proceedings of the 19th SIGBioMed Workshop on Biomedical Language Processing, BioNLP 2020, Online, July 9, 2020 BioNLP (2020)
Ning Wang, Fan Luo, Vishal Peddagangireddy, Koduvayur P. Subbalakshmi, Rajarathnam Chandramouli
Personalized Early Stage Alzheimer's Disease Detection: A Case Study of President Reagan's Speeches. BioNLP (2020)
Dimitris Pappas, Petros Stavropoulos, Ion Androutsopoulos, Ryan T. McDonald
BioMRC: A Dataset for Biomedical Machine Reading Comprehension. BioNLP (2020)
Chen Lin, Timothy A. Miller, Dmitriy Dligach, Farig Sadeque, Steven Bethard, Guergana Savova
A BERT-based One-Pass Multi-Task Model for Clinical Temporal Relation Extraction. BioNLP (2020)
Aurelie Mascio, Zeljko Kraljevic, Daniel Bean, Richard J. B. Dobson, Robert Stewart, Rebecca Bendayan, Angus Roberts
Comparative Analysis of Text Classification Approaches in Electronic Health Records. BioNLP (2020)
Elaheh ShafieiBavani, Antonio Jimeno-Yepes, Xu Zhong, David Martínez
Global Locality in Biomedical Relation and Event Extraction. BioNLP (2020)
Manirupa Das, Juanxi Li, Eric Fosler-Lussier, Simon M. Lin, Steve Rust, Yungui Huang, Rajiv Ramnath
Sequence-to-Set Semantic Tagging for Complex Query Reformulation and Automated Text Categorization in Biomedical IR using Self-Attention. BioNLP (2020)
Liyan Xu, Julien Hogan, Rachel E. Patzer, Jinho D. Choi
Noise Pollution in Hospital Readmission Prediction: Long Document Classification with Reinforcement Learning. BioNLP (2020)
David Chang, Ivana Balazevic, Carl Allen, Daniel Chawla, Cynthia Brandt, Richard Andrew Taylor
Benchmark and Best Practices for Biomedical Knowledge Graph Embeddings. BioNLP (2020)
Thomas Searle, Zina M. Ibrahim, Richard J. B. Dobson
Experimental Evaluation and Development of a Silver-Standard for the MIMIC-III Clinical Coding Dataset. BioNLP (2020)
Olga Kovaleva, Chaitanya Shivade, Satyananda Kashyap, Karina Kanjaria, Joy T. Wu, Deddeh Ballah, Adam Coy, Alexandros Karargyris, Yufan Guo, David James Beymer, Anna Rumshisky, Vandana V. Mukherjee
Towards Visual Dialog for Radiology. BioNLP (2020)
Avi Bleiweiss
Neural Transduction of Letter Position Dyslexia using an Anagram Matrix Representation. BioNLP (2020)

2018

2017

Simon Baker, Anna Korhonen
Initializing neural networks for hierarchical multi-label text classification. BioNLP (2017)