Genome Regions Involved in Multiple Regulatory Pathways Identified Using GSEL, A Genome-Wide Database of Regulatory Sequence Elements of Geobacter sulfurreducens.
Julia KrushkalMarko PuljicBin YanJose F. BarbeRadhakrishnan MahadevanBradley PostierRegina A. O'NeilGemma RegueraChing LeangLaurie N. DiDonatoCinthia NúñezBarbara A. MethéRonald M. AdkinsDerek R. LovleyPublished in: BMEI (1) (2008)
Keyphrases
- genome wide
- cis regulatory
- transcription factors
- transcription factor binding sites
- database
- human genome
- high throughput
- regulatory elements
- genome sequences
- differential expression
- transcriptional regulation
- regulatory networks
- binding sites
- dna binding
- high throughput sequencing
- genome scale
- signaling pathways
- biological processes
- dna sequences
- microarray
- gene regulation
- database systems
- gene gene interactions
- copy number
- gene sets
- expression profiles
- single nucleotide polymorphisms
- metabolic pathways
- genomic sequences
- genomic data
- gene expression
- alternative splicing
- complex diseases
- component analysis
- systems biology
- protein protein interactions
- biological data
- data acquisition
- data management
- real time