Incorporating substrate sequence motifs and spatial amino acid composition to identify kinase-specific phosphorylation sites on protein three-dimensional structures.
Min-Gang SuTzong-Yi LeePublished in: BMC Bioinform. (2013)
Keyphrases
- protein sequences
- amino acid composition
- protein families
- sequence alignment
- structural motifs
- biological sequences
- amino acids
- genome sequences
- computational biology
- protein structure
- rna sequences
- secondary structure
- amino acid sequences
- sequence databases
- binding sites
- motif discovery
- protein function
- spatial data
- immune genetic algorithm
- spatial information
- fold cross validation
- neural network
- machine learning
- dna sequences