DACIDR: deterministic annealed clustering with interpolative dimension reduction using a large collection of 16S rRNA sequences.
Yang RuanSaliya EkanayakeMina RhoHaixu TangSeung-Hee BaeJudy QiuGeoffrey C. FoxPublished in: BCB (2012)
Keyphrases
- dimension reduction
- cluster analysis
- high dimensional data
- high dimensional data analysis
- unsupervised learning
- high dimensionality
- high dimensional
- principal component analysis
- clustering algorithm
- feature extraction
- high dimensional problems
- singular value decomposition
- manifold learning
- k means
- feature subspace
- low dimensional
- clustering method
- random projections
- feature space
- linear discriminant analysis
- feature selection
- discriminative information
- data clustering
- dimensionality reduction
- database
- data sets
- particle filter
- dimension reduction methods
- discriminant analysis
- self organizing maps
- nearest neighbor
- knn
- probabilistic model
- preprocessing
- training data
- sparse metric learning