GPU acceleration of Darwin read overlapper for de novo assembly of long DNA reads.
Nauman AhmedTong Dong QiuKoen BertelsZaid Al-ArsPublished in: BMC Bioinform. (2020)
Keyphrases
- binding sites
- rna seq
- dna sequences
- rna sequences
- genomic sequences
- real time
- dna computing
- human genome
- high throughput sequencing
- biological sequences
- motif discovery
- motif finding
- graphics hardware
- reference genome
- tandem mass spectra
- artificial life
- parallel implementation
- high throughput
- gene expression
- gpu implementation
- microarray