Single-sequence protein structure prediction using supervised transformer protein language models.
Wenkai WangZhenling PengJianyi YangPublished in: Nat. Comput. Sci. (2022)
Keyphrases
- protein structure prediction
- language model
- protein structure
- protein sequences
- language modeling
- amino acids
- sequence alignment
- protein fold recognition
- drug design
- n gram
- speech recognition
- graph theory
- protein homology
- language modelling
- information retrieval
- statistical language models
- retrieval model
- document retrieval
- probabilistic model
- protein folding
- query expansion
- coarse grained
- sequence analysis
- vector space model
- computational biology
- secondary structure
- amino acid sequences
- language models for information retrieval
- relevance model
- test collection
- multiple sequence alignments
- fine grained
- protein function
- query terms
- smoothing methods
- pairwise
- high level