Gene prediction in eukaryotes with a generalized hidden Markov model that uses hints from external sources.
Mario StankeOliver SchöffmannBurkhard MorgensternStephan WaackPublished in: BMC Bioinform. (2006)
Keyphrases
- hidden markov models
- gene prediction
- dna sequences
- speech recognition
- markov models
- viterbi algorithm
- conditional random fields
- handwritten word recognition
- hidden states
- genomic sequences
- hidden state
- human genome
- sequential data
- gesture recognition
- hierarchical dirichlet process
- kernel density
- minimum classification error
- hierarchical hidden markov model
- continuous hidden markov models
- baum welch
- computational methods