A computational approach toward label-free protein quantification using predicted peptide detectability.
Haixu TangRandy J. ArnoldPedro AlvesZhiyin XunDavid E. ClemmerMilos V. NovotnyJames P. ReillyPredrag RadivojacPublished in: ISMB (Supplement of Bioinformatics) (2006)
Keyphrases
- amino acids
- tandem mass spectra
- mass spectrometry
- mass spectra
- protein sequences
- amino acid residues
- tandem mass spectrometry
- protein structure
- ms ms
- high throughput
- amino acid sequences
- image quality
- protein structure prediction
- mass spectrometry data
- protein classification
- protein function
- image labeling
- protein folding
- secondary structure
- signal detection
- feature selection
- protein interaction data
- subcellular localization
- experimentally determined
- multi label
- mhc class ii
- tandem mass
- contact map
- molecular dynamics
- genome wide
- noise level