gRINN: a tool for calculation of residue interaction energies and protein energy network analysis of molecular dynamics simulations.
Onur SerçinogluPemra OzbekPublished in: Nucleic Acids Res. (2018)
Keyphrases
- network analysis
- molecular dynamics simulations
- molecular dynamics
- social network analysis
- protein protein interactions
- protein structure prediction
- amino acids
- protein interaction
- text mining
- complex networks
- link prediction
- graph theory
- network structure
- community detection
- information networks
- contact map
- protein structure
- protein sequences
- energy consumption
- social networks
- community structure
- biological networks
- protein folding
- graph cuts
- active learning
- data analysis