Detecting protein sequence conservation via metric embeddings.
Eran HalperinJeremy BuhlerRichard M. KarpRobert KrauthgamerBen WestoverPublished in: ISMB (Supplement of Bioinformatics) (2003)
Keyphrases
- protein sequences
- computational biology
- protein structure
- protein classification
- amino acids
- protein structure and function
- secondary structure
- sequence analysis
- protein structure prediction
- amino acid sequences
- protein function
- protein folding
- protein secondary structure
- structural motifs
- computational approaches
- biological sequences
- metric space
- distance measure
- dimensionality reduction
- multiple sequence alignment
- sequence alignment
- high dimensional data
- coarse grained
- euclidean space
- feature selection
- protein protein
- vector space
- physico chemical
- protein structural
- amino acid composition