SOrt-ITEMS: Sequence orthology based approach for improved taxonomic estimation of metagenomic sequences.
Mohammed Monzoorul HaqueTarini Shankar GhoshDinakar KomanduriSharmila S. MandePublished in: Bioinform. (2009)
Keyphrases
- sequence analysis
- genomic sequences
- sequence data
- long sequences
- sequence alignment
- pseudorandom
- biological sequences
- sequence matching
- dna sequences
- hidden markov models
- computational biology
- pairwise
- quasi periodic
- sequential data
- parameter estimation
- accurate estimation
- estimation accuracy
- improved algorithm
- protein sequences
- sequence classification
- background knowledge
- learning algorithm
- event sequences
- estimation process
- estimation algorithm
- sequence similarity
- sequence patterns
- global alignment