VIPR: A probabilistic algorithm for analysis of microbial detection microarrays.
Adam F. AllredGuang WuTuya WulanKael F. FischerMichael R. HolbrookRobert B. TeshDavid WangPublished in: BMC Bioinform. (2010)
Keyphrases
- detection algorithm
- dynamic programming
- learning algorithm
- np hard
- objective function
- detection method
- preprocessing
- computational cost
- high accuracy
- context free parsing
- times faster
- simulated annealing
- worst case
- cost function
- probabilistic model
- experimental evaluation
- line detection
- sequence data
- similarity measure
- optimal solution
- optimization algorithm
- neural network
- anti noise
- false detections
- data analysis
- segmentation algorithm
- generative model
- em algorithm
- expectation maximization
- input data
- k means
- data sets