Improving conditional random field model for prediction of protein-RNA residue-base contacts.
Morihiro HayashidaNoriyuki OkadaMayumi KamadaHitoshi KoyanoPublished in: Quant. Biol. (2018)
Keyphrases
- random field model
- contact map
- contact maps
- protein structure prediction
- secondary structure
- multiscale
- protein structure
- protein chains
- random fields
- amino acids
- solvent accessibility
- protein secondary structure
- subcellular localization
- amino acid sequences
- protein sequences
- protein function
- coarse grained
- drug design
- prediction accuracy
- protein secondary structure prediction
- rna secondary structure prediction
- protein functional
- structural motifs
- experimentally determined
- genome wide
- protein interaction
- information retrieval
- remote homology detection
- computational biology
- genome sequences
- computational methods
- dna binding
- rna secondary structures
- rna sequences
- genomic sequences